Detailed information NTG0841422

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: VP459_RS12950
• Genome accession: NZ_CP142600
• Coordinates: 2648781..2649383 (+)
• Length: 200 a.a.
• NCBI ID: WP_000271551.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain M19060305
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2643781..2654383

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VP459_RS12910 (VP459_12915)	-	2643930..2644049 (+)	120	WP_000840602.1	hypothetical protein	-
VP459_RS12915 (VP459_12920)	mreC	2644249..2645091 (+)	843	WP_000911038.1	rod shape-determining protein MreC	-
VP459_RS12920 (VP459_12925)	mreD	2645091..2645621 (+)	531	WP_001259930.1	rod shape-determining protein MreD	-
VP459_RS12925 (VP459_12930)	rplU	2645857..2646165 (+)	309	WP_000457386.1	50S ribosomal protein L21	-
VP459_RS12930 (VP459_12935)	-	2646171..2646491 (+)	321	WP_000633692.1	ribosomal-processing cysteine protease Prp	-
VP459_RS12935 (VP459_12940)	rpmA	2646503..2646787 (+)	285	WP_000916187.1	50S ribosomal protein L27	-
VP459_RS12940 (VP459_12945)	obgE	2647007..2648299 (+)	1293	WP_000496100.1	GTPase ObgE	-
VP459_RS12945 (VP459_12950)	-	2648312..2648767 (+)	456	WP_000368899.1	ACT domain-containing protein	-
VP459_RS12950 (VP459_12955)	ruvA	2648781..2649383 (+)	603	WP_000271551.1	Holliday junction branch migration protein RuvA	Machinery gene
VP459_RS12955 (VP459_12960)	ruvB	2649415..2650419 (+)	1005	WP_001005767.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
VP459_RS12960 (VP459_12965)	queA	2650421..2651446 (+)	1026	WP_001008435.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
VP459_RS12965 (VP459_12970)	tgt	2651469..2652608 (+)	1140	WP_001112045.1	tRNA guanosine(34) transglycosylase Tgt	-
VP459_RS12970 (VP459_12975)	yajC	2652627..2652887 (+)	261	WP_001160682.1	preprotein translocase subunit YajC	-

Sequence

Protein

• Length: 200 a.a.
• Molecular weight: 22253.45 Da
• Isoelectric Point: 5.7132

>NTDB_id=841422 VP459_RS12950 WP_000271551.1 2648781..2649383(+) (ruvA) [Staphylococcus aureus strain M19060305]
MYAYVKGKLTHLYPTHVVVETAGVGYEIQTPNSYRFQKQLDHEVLIHTSLIVREDAQLLYGFSSEEEKDMFLSLIKVTGI
GPKSALAILATSTPNEVKRAIENENDTYLTKFPGIGKKTARQIVLDLKGKVKITEEDSDSLLQVDATSTVQDQFVQEAML
ALEALGYSKRELAKVEKTLNKNKYDSVDEAVKAGLQLVVS

Nucleotide

• Length: 603 bp

>NTDB_id=841422 VP459_RS12950 WP_000271551.1 2648781..2649383(+) (ruvA) [Staphylococcus aureus strain M19060305]
ATGTACGCGTATGTCAAAGGTAAGTTAACACATTTATATCCTACACACGTAGTTGTTGAAACTGCTGGTGTTGGTTATGA
AATTCAAACACCAAATTCTTATCGTTTTCAAAAGCAACTAGATCATGAAGTTTTAATTCATACATCTTTAATTGTTCGTG
AAGATGCACAATTATTGTATGGATTTAGTAGTGAAGAAGAGAAAGATATGTTCTTGAGTTTAATTAAAGTTACTGGTATT
GGTCCGAAATCAGCTTTAGCTATTTTAGCGACAAGTACGCCTAATGAAGTAAAACGTGCCATTGAAAATGAAAATGATAC
GTATTTAACTAAATTCCCAGGAATTGGTAAGAAAACGGCAAGACAGATTGTCTTAGATTTAAAAGGTAAAGTGAAAATCA
CTGAAGAAGATAGCGATTCATTATTACAAGTAGACGCTACTTCGACGGTGCAAGATCAATTCGTGCAAGAAGCAATGTTA
GCGTTAGAAGCATTAGGTTATTCTAAACGAGAGCTTGCAAAAGTTGAGAAAACGTTAAATAAAAATAAATATGACTCAGT
TGATGAAGCTGTTAAGGCAGGTCTTCAATTAGTTGTATCTTAA

Domains

Predicted by InterProScan.

• Helix-hairpin-helix domain (HHH_5) (71-128)

• RuvA N terminal domain (RuvA_N) (1-61)

• RuvA, C-terminal domain (RuvA_C) (156-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae TIGR4	46.734	99.5	0.465
ruvA	Streptococcus pneumoniae R6	46.231	99.5	0.46
ruvA	Streptococcus pneumoniae D39	46.231	99.5	0.46
ruvA	Bacillus subtilis subsp. subtilis str. 168	42.714	99.5	0.425