Detailed information NTG0841230

Bioinformatically predicted

Overview

• Name: ciaH
• Type: Regulator
• Locus tag: VVB72_RS08715
• Genome accession: NZ_CP142589
• Coordinates: 1759064..1760434 (-)
• Length: 456 a.a.
• NCBI ID: WP_003130363.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain C20
• Function: Required for optimal comC expression (predicted from homology) Competence regulation

Genomic Context

Location: 1754064..1765434

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VVB72_RS08700 (VVB72_08700)	-	1755236..1756669 (-)	1434	WP_023189694.1	6-phospho-beta-glucosidase	-
VVB72_RS08705 (VVB72_08705)	yidD	1756791..1757057 (-)	267	WP_010906087.1	membrane protein insertion efficiency factor YidD	-
VVB72_RS08710 (VVB72_08710)	-	1757174..1758916 (-)	1743	WP_039115753.1	1-deoxy-D-xylulose-5-phosphate synthase	-
VVB72_RS08715 (VVB72_08715)	ciaH	1759064..1760434 (-)	1371	WP_003130363.1	sensor histidine kinase	Regulator
VVB72_RS08720 (VVB72_08720)	ciaR	1760527..1761195 (-)	669	WP_021722129.1	response regulator transcription factor	Regulator
VVB72_RS08725 (VVB72_08725)	-	1761373..1762347 (-)	975	WP_003130365.1	LacI family DNA-binding transcriptional regulator	-
VVB72_RS08730 (VVB72_08730)	-	1762500..1764755 (-)	2256	WP_025016945.1	glycoside hydrolase family 65 protein	-

Sequence

Protein

• Length: 456 a.a.
• Molecular weight: 51300.85 Da
• Isoelectric Point: 9.4537

>NTDB_id=841230 VVB72_RS08715 WP_003130363.1 1759064..1760434(-) (ciaH) [Lactococcus lactis subsp. lactis strain C20]
MKKIIKKVKSSAIVKNDGKNFLHFFLAFTVIFVALAVIIIQVMQLGMYRATDQNLHNLAQNRVFLIEAANNQLGMNNSQD
SGYYGPNNSVIFYDSEGKSFIPSAGSNANISTNFGMSLLQKTMKFNENQINTIQTVSVKNPYGDNWHYRYLTTSQFIITN
TDGTVTPVYAQIFSNVDQIQDAMSRAMWVIVTTMITFWLLSVIISLYLANWTLKPILAAYEKQKEFVENASHELRTPLAI
LQNRLELLFQKPTATIIDESENISESLSEVRNMRLLTSNLLNLARRDSGIRIEPEATTATYFENIFNSYEMLAENAGKKF
SGHLKLDGTINLDQALIKQLLTILFDNALKYTGDEGEISVDVQKNGGFLVFAVADNGEGISDEDKKKIFDRFFRVDKART
RQKGGLGLGLSLAKQIVEAYNGKITVEDNKPKGTKFIVRIRVDSTISNPAKIFQKL

Nucleotide

• Length: 1371 bp

>NTDB_id=841230 VVB72_RS08715 WP_003130363.1 1759064..1760434(-) (ciaH) [Lactococcus lactis subsp. lactis strain C20]
TTGAAGAAAATAATTAAAAAAGTTAAATCTTCAGCTATTGTAAAAAATGATGGGAAAAATTTCCTTCATTTTTTTCTAGC
TTTTACAGTCATTTTTGTTGCTTTAGCCGTGATTATTATTCAAGTCATGCAATTAGGAATGTATCGAGCGACTGACCAAA
ATTTACACAATTTGGCTCAAAACCGAGTCTTTTTGATAGAAGCAGCGAATAATCAATTAGGAATGAATAATTCGCAAGAT
AGTGGCTATTACGGTCCCAATAATAGTGTAATTTTTTATGATTCAGAGGGTAAAAGTTTCATACCTTCAGCGGGTTCAAA
TGCAAATATAAGTACAAACTTTGGCATGAGCCTTCTGCAAAAAACAATGAAATTTAACGAAAATCAAATTAACACTATTC
AAACTGTTTCTGTAAAAAATCCTTATGGAGATAATTGGCACTATCGTTATCTGACAACATCACAATTTATTATTACAAAT
ACTGATGGAACAGTAACTCCGGTTTATGCACAAATTTTTTCAAATGTTGACCAAATTCAAGATGCCATGAGCCGAGCCAT
GTGGGTCATTGTGACAACAATGATTACTTTCTGGCTTCTGTCAGTAATTATTAGTCTATATCTTGCAAACTGGACATTAA
AACCAATTTTGGCCGCTTATGAAAAACAAAAAGAATTTGTTGAAAATGCTTCACATGAATTGAGAACACCTCTGGCAATC
TTGCAAAATCGTCTAGAATTACTTTTCCAAAAGCCAACAGCAACAATTATTGATGAATCAGAAAATATTTCTGAAAGTTT
ATCAGAAGTTCGTAATATGCGTTTATTAACAAGTAACTTACTGAACTTAGCTCGTCGAGATTCTGGAATCAGAATTGAGC
CAGAGGCGACTACGGCAACTTATTTTGAGAATATTTTTAATAGCTATGAAATGCTTGCTGAAAACGCAGGTAAAAAGTTT
TCAGGCCATTTGAAATTAGATGGAACGATTAATTTGGACCAAGCCCTGATCAAACAATTGCTAACCATATTATTTGATAA
TGCTCTTAAATACACGGGTGATGAGGGTGAAATCTCTGTAGATGTTCAAAAAAATGGGGGATTCTTAGTTTTTGCTGTCG
CCGATAATGGTGAAGGAATTTCTGATGAAGATAAGAAAAAAATCTTTGACCGCTTTTTCCGAGTAGATAAAGCAAGAACG
CGTCAAAAAGGTGGCTTAGGTTTGGGTCTTTCTCTGGCCAAACAAATTGTTGAAGCTTACAATGGGAAGATTACAGTTGA
AGATAATAAACCTAAAGGTACAAAATTCATTGTTAGAATTCGTGTGGATAGCACAATTTCAAATCCTGCAAAAATTTTCC
AAAAGTTGTAA

Domains

Predicted by InterProScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (333-442)

• His Kinase A (phospho-acceptor) domain (HisKA) (223-289)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ciaH	Streptococcus mutans UA159	48.837	94.298	0.461
ciaH	Streptococcus pneumoniae Rx1	44.321	98.465	0.436
ciaH	Streptococcus pneumoniae D39	44.321	98.465	0.436
ciaH	Streptococcus pneumoniae R6	44.321	98.465	0.436
ciaH	Streptococcus pneumoniae TIGR4	44.321	98.465	0.436