Detailed information NTG0841229

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: VVB72_RS08580
• Genome accession: NZ_CP142589
• Coordinates: 1729581..1730579 (-)
• Length: 332 a.a.
• NCBI ID: WP_039115741.1
• Uniprot ID: -
• Organism: Lactococcus lactis subsp. lactis strain C20
• Function: repress the expression of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1724581..1735579

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VVB72_RS08560 (VVB72_08560)	trxA	1724971..1725285 (-)	315	WP_003129442.1	thioredoxin	-
VVB72_RS08565 (VVB72_08565)	mutS/mutS2	1725382..1727712 (-)	2331	WP_017864836.1	endonuclease MutS2	Machinery gene
VVB72_RS08570 (VVB72_08570)	-	1727757..1728317 (-)	561	WP_003129445.1	CvpA family protein	-
VVB72_RS08575 (VVB72_08575)	-	1728477..1729442 (-)	966	WP_023189681.1	NAD(P)/FAD-dependent oxidoreductase	-
VVB72_RS08580 (VVB72_08580)	ccpA	1729581..1730579 (-)	999	WP_039115741.1	catabolite control protein A	Regulator
VVB72_RS08585 (VVB72_08585)	-	1730794..1731882 (+)	1089	WP_003129448.1	M24 family metallopeptidase	-
VVB72_RS08590 (VVB72_08590)	-	1732166..1734166 (-)	2001	WP_023189683.1	cell division site-positioning protein MapZ family protein	-
VVB72_RS08595 (VVB72_08595)	-	1734314..1735468 (-)	1155	WP_003129451.1	THUMP domain-containing class I SAM-dependent RNA methyltransferase	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36606.66 Da
• Isoelectric Point: 4.9196

>NTDB_id=841229 VVB72_RS08580 WP_039115741.1 1729581..1730579(-) (ccpA) [Lactococcus lactis subsp. lactis strain C20]
MVESTTTIYDVARVAGVSMATVSRVVNGNANVKEKTRQKVLEAIAELDYRPNAVARGLSSKRTTTVGVILPTITSTYFAA
ITRGVDDIASMYKYNMILANSDNDVEKEEKVLETFLSKQVDGIVYMGSSLDEKIRTSLKNSRTPVVLVGTIDGDKEIPSV
NIDYHLAAYQSTKKLIDSGNKKIAYIMGSLKDVENTERMVGYQEALLEANTEFDENLVFEGNYSYEQGKALAERLLERGA
TSAVVSHDTVAVGLLSAMMDKGVKVPEDFEIISGANSPITQYTYPTLTSVNQPLYDLGAVAMRLLTKLMLKEDVEQNQLV
LDHEIFSRRSTK

Nucleotide

• Length: 999 bp

>NTDB_id=841229 VVB72_RS08580 WP_039115741.1 1729581..1730579(-) (ccpA) [Lactococcus lactis subsp. lactis strain C20]
ATGGTAGAATCAACAACAACAATTTATGATGTGGCACGTGTCGCCGGAGTGTCAATGGCAACCGTTAGTCGTGTTGTAAA
TGGAAATGCAAATGTAAAGGAAAAGACGCGCCAGAAGGTCTTAGAAGCTATTGCTGAGCTTGACTATCGTCCTAATGCAG
TTGCGCGCGGACTCTCAAGTAAACGTACAACAACAGTTGGTGTTATCTTGCCAACCATCACTTCAACTTACTTCGCAGCG
ATTACTCGCGGGGTTGATGATATCGCTTCCATGTATAAATACAACATGATTTTAGCTAATAGTGATAATGATGTTGAAAA
AGAAGAAAAAGTTTTAGAAACTTTCTTATCAAAACAAGTTGACGGAATCGTCTATATGGGTTCATCTTTAGATGAAAAAA
TTAGAACTTCCCTCAAAAATTCAAGAACACCTGTCGTTTTAGTTGGAACAATCGATGGAGATAAAGAAATTCCATCTGTT
AATATTGATTACCATTTGGCTGCTTATCAATCAACTAAAAAATTGATTGATAGTGGAAATAAAAAAATCGCTTATATCAT
GGGTTCATTGAAAGACGTTGAAAATACAGAACGTATGGTTGGTTATCAAGAAGCTTTGCTTGAAGCAAATACTGAATTTG
ATGAAAACCTCGTTTTTGAAGGTAATTATAGCTATGAACAAGGAAAAGCACTTGCTGAACGTTTACTTGAGCGAGGAGCA
ACTTCTGCAGTAGTATCACATGATACAGTAGCCGTTGGACTCTTGTCTGCAATGATGGATAAAGGAGTGAAAGTTCCTGA
AGATTTCGAAATTATCTCAGGTGCAAATTCACCAATTACTCAATATACATATCCAACTTTAACTTCTGTTAACCAACCCC
TTTACGATTTGGGAGCAGTAGCAATGCGTCTTTTGACAAAATTAATGCTTAAAGAAGATGTTGAACAAAATCAATTAGTT
TTGGATCATGAAATCTTTTCTCGTCGTTCTACCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (7-52)

• Periplasmic binding proteins and sugar binding domain of LacI family (Peripla_BP_1) (64-271)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	99.398	100	0.994
ccpA	Streptococcus pneumoniae D39	56.798	99.699	0.566
ccpA	Streptococcus gordonii str. Challis substr. CH1	56.798	99.699	0.566