Detailed information NTG0840950

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: QP018_RS11395
• Genome accession: NZ_CP126975
• Coordinates: 2406951..2408147 (-)
• Length: 398 a.a.
• NCBI ID: WP_039153404.1
• Uniprot ID: A0AAX3XBY3
• Organism: Gallibacterium anatis strain BJF12
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	2406108..2406761	2406951..2408147	flank	190

Gene organization within MGE regions

Location: 2406108..2408147

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QP018_RS11390 (QP018_11390)	-	2406108..2406761 (+)	654	WP_039153406.1	IS1595 family transposase	-
QP018_RS11395 (QP018_11395)	dprA	2406951..2408147 (-)	1197	WP_039153404.1	DNA-processing protein DprA	Machinery gene

Sequence

Protein

• Length: 398 a.a.
• Molecular weight: 43337.74 Da
• Isoelectric Point: 6.5697

>NTDB_id=840950 QP018_RS11395 WP_039153404.1 2406951..2408147(-) (dprA) [Gallibacterium anatis strain BJF12]
MQTVTTLLRLALLPQFGAIKIQQLLEQISLDTLLSYDRQTLSQIGWNAAQIQAWFSPPQAIIDTVLNWQQQADNHILHYF
DHSYPLLLKQTRSAPPLLFVKGNIDVLSSPQIAMVGSRYCSPYGEHYAQTIAGELAHSGITINSGLALGIDGICHRAALD
NHGKTVAVLGSGLDQLYPARHKKLAQQILENNGALLSELFPNTPPIAENFPRRNRIISGLSFGTIVIEASQKSGSLITAR
LALEQNREVFAVPGALDNPLSQGCHHLIKQGAWLIENAQDVLEILTPQISSLMPFTPAMETQTPIGNSSTAQSTIAISPQ
AKSGYTPPTINKKAVIKLDIPPQHQALMQQLNSATAISPDELSTALNRPIDQILTDLLELEMLGAVQQIQGGYIKNIV

Nucleotide

• Length: 1197 bp

>NTDB_id=840950 QP018_RS11395 WP_039153404.1 2406951..2408147(-) (dprA) [Gallibacterium anatis strain BJF12]
ATGCAAACAGTAACCACACTTTTACGTTTAGCACTGCTGCCGCAATTCGGTGCTATCAAAATTCAACAACTGCTTGAACA
AATCTCACTAGATACGCTGCTCAGCTACGATCGACAAACACTCAGCCAAATCGGTTGGAATGCTGCGCAAATTCAGGCTT
GGTTTTCACCGCCGCAAGCGATTATTGACACCGTTCTGAATTGGCAACAACAGGCAGACAACCATATTCTGCACTATTTT
GATCACAGTTACCCGCTGTTGTTGAAACAAACTCGCTCCGCACCGCCACTGCTGTTTGTTAAAGGTAACATTGATGTGCT
CTCTTCGCCACAAATCGCTATGGTAGGCAGTCGCTATTGTTCACCTTATGGCGAACATTACGCCCAAACCATCGCCGGCG
AACTGGCACATAGCGGCATCACCATTAACAGCGGTTTAGCCTTAGGCATTGATGGCATTTGTCATCGTGCCGCTTTGGAT
AATCACGGCAAAACCGTTGCTGTTTTGGGCAGCGGCTTGGATCAACTTTATCCGGCTCGCCACAAAAAATTGGCACAACA
AATTCTGGAAAACAACGGCGCATTGCTATCGGAACTATTTCCCAACACGCCGCCCATTGCTGAAAATTTTCCACGCCGAA
ACCGTATTATCAGCGGTCTCTCATTCGGCACCATCGTCATCGAAGCCTCGCAAAAAAGCGGTTCATTAATTACTGCACGT
CTGGCATTGGAACAAAATCGCGAAGTATTCGCCGTTCCAGGTGCATTGGACAATCCATTGAGTCAAGGTTGCCATCACTT
AATCAAACAAGGGGCGTGGTTAATTGAAAATGCACAGGATGTATTAGAGATTCTGACACCGCAAATCTCATCATTAATGC
CGTTTACACCAGCAATGGAGACACAAACGCCAATCGGCAATAGCTCTACTGCACAAAGCACGATCGCAATATCGCCACAA
GCAAAATCCGGTTACACGCCGCCGACCATCAACAAAAAAGCGGTGATCAAACTTGATATTCCGCCACAACATCAAGCATT
AATGCAACAATTAAACAGTGCAACTGCGATTTCACCGGATGAACTTTCGACTGCATTAAATCGCCCTATCGATCAAATTC
TTACCGATCTATTGGAACTGGAAATGCTCGGTGCAGTGCAACAAATCCAAGGAGGTTATATTAAAAATATCGTCTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (70-276)

• DprA winged helix domain (DprA_WH) (342-392)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	49.239	98.995	0.487
dprA	Haemophilus influenzae Rd KW20	51.63	92.462	0.477
dprA	Vibrio campbellii strain DS40M4	44.359	97.99	0.435
dprA	Legionella pneumophila strain ERS1305867	38.75	100	0.389