Detailed information    

insolico Bioinformatically predicted

Overview


Name   micB   Type   Regulator
Locus tag   F6I26_RS03715 Genome accession   NZ_CP126961
Coordinates   738929..740281 (+) Length   450 a.a.
NCBI ID   WP_101800515.1    Uniprot ID   A0AAW5TGL2
Organism   Streptococcus anginosus strain UMB4708     
Function   repress competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 733929..745281
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6I26_RS03690 (F6I26_003690) ccpA 734176..735180 (+) 1005 WP_101800511.1 catabolite control protein A Regulator
  F6I26_RS03695 (F6I26_003695) - 735273..736271 (+) 999 WP_024051860.1 glycosyltransferase -
  F6I26_RS03700 (F6I26_003700) - 736273..737586 (+) 1314 WP_101800512.1 glycosyltransferase family 4 protein -
  F6I26_RS03705 (F6I26_003705) - 737613..737954 (+) 342 WP_101800513.1 hypothetical protein -
  F6I26_RS03710 (F6I26_003710) micA 738235..738936 (+) 702 WP_003025150.1 response regulator YycF Regulator
  F6I26_RS03715 (F6I26_003715) micB 738929..740281 (+) 1353 WP_101800515.1 cell wall metabolism sensor histidine kinase VicK Regulator
  F6I26_RS03720 (F6I26_003720) vicX 740283..741086 (+) 804 WP_024051857.1 MBL fold metallo-hydrolase Regulator
  F6I26_RS03725 (F6I26_003725) - 741165..741434 (+) 270 Protein_694 YbaN family protein -
  F6I26_RS03730 (F6I26_003730) rnc 741816..742514 (+) 699 WP_150888249.1 ribonuclease III -

Sequence


Protein


Download         Length: 450 a.a.        Molecular weight: 51362.55 Da        Isoelectric Point: 4.6486

>NTDB_id=840790 F6I26_RS03715 WP_101800515.1 738929..740281(+) (micB) [Streptococcus anginosus strain UMB4708]
MIDNIRQFIVSNDFVFVLLILGFILVITLLSLENRRDNIRIRQLNQKVKDLIAGNYSEILDVQGGPEITDITNSINDLSE
VIRLTHENLEQETKRLSSILSYMTDGVLATNRRGQIIMINDMATKQLGVKESEARKMNILKLLDIEDEYDLRDLITKVPE
LTIDSQDENGEFLSLRVRFALIRRESGFISGLVAVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALS
EPVAPDFIKVSLDETNRMMRMVSDLLSLSRIDNATSHLDIELTNFTAFITFILNRFDKIRSQNDDKKYEIIRDYPINSIW
VEIDTDKMTQVIDNIINNAIKYSPDGGKITVSMKTTDTQMILSISDEGLGIPKKDLPKIFDRFYRVDKARSRAQGGSGLG
LAIAKEIIKQHNGFIWAKSEYGKGSTFTIVLPYDKEAVKDDDWEEDELEG

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=840790 F6I26_RS03715 WP_101800515.1 738929..740281(+) (micB) [Streptococcus anginosus strain UMB4708]
ATGATTGATAATATTAGACAATTTATTGTATCAAACGACTTTGTATTTGTTTTACTTATTTTAGGGTTCATCTTGGTGAT
TACCTTGCTTTCCTTGGAAAATAGGCGAGACAATATTCGTATTCGCCAATTGAATCAAAAAGTAAAAGATTTAATTGCAG
GCAATTACTCAGAAATTTTAGATGTACAAGGTGGTCCAGAAATTACGGATATTACCAATAGTATCAATGATTTATCTGAG
GTAATCCGTCTAACGCATGAAAATTTAGAGCAAGAAACTAAGCGCCTGTCGAGTATTTTATCCTATATGACGGACGGTGT
TCTTGCGACCAATCGTCGTGGGCAGATTATCATGATCAATGATATGGCGACCAAGCAGTTGGGGGTCAAAGAGTCTGAAG
CACGAAAGATGAATATCTTAAAACTGTTGGATATCGAAGACGAATATGACTTACGAGACTTGATTACGAAAGTTCCAGAG
TTGACCATTGATTCGCAGGATGAAAATGGAGAGTTTTTAAGTTTACGTGTCCGATTTGCCTTGATTCGGCGAGAATCAGG
CTTTATTTCAGGGCTGGTTGCAGTGCTACACGATACAACGGAGCAGGAAAAAGAAGAGCGTGAGCGGAGACTGTTTGTTT
CGAATGTCAGTCACGAATTACGTACTCCCTTGACCAGTGTCAAGTCTTATCTGGAAGCACTAGATGAAGGTGCCTTATCA
GAACCAGTCGCACCGGATTTCATCAAGGTTTCATTAGACGAGACCAATCGGATGATGCGCATGGTTTCGGACTTGCTGAG
TTTGTCACGTATTGACAATGCAACCAGTCATTTGGATATTGAATTGACGAATTTTACAGCTTTTATCACCTTTATTTTGA
ACCGTTTTGATAAAATCAGAAGCCAGAATGATGATAAAAAGTATGAAATTATACGAGATTATCCGATTAACTCTATTTGG
GTCGAAATTGATACAGATAAGATGACACAGGTGATTGATAATATTATCAACAATGCCATTAAATATTCTCCTGACGGTGG
CAAGATTACGGTCAGTATGAAAACGACGGATACCCAAATGATTTTGTCGATTTCAGATGAAGGCTTAGGAATTCCTAAAA
AAGATTTACCGAAAATTTTTGATAGATTTTATCGTGTAGATAAAGCGAGAAGTCGTGCACAAGGTGGGTCCGGACTGGGC
TTAGCCATTGCCAAAGAGATTATCAAGCAGCATAACGGCTTTATCTGGGCAAAGAGCGAGTACGGCAAAGGTTCAACCTT
TACTATTGTCCTGCCTTATGATAAGGAAGCTGTCAAAGATGATGATTGGGAAGAAGATGAATTAGAAGGGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  micB Streptococcus pneumoniae Cp1015

81.093

97.556

0.791

  vicK Streptococcus mutans UA159

71.883

90.889

0.653