Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   F6I26_RS03690 Genome accession   NZ_CP126961
Coordinates   734176..735180 (+) Length   334 a.a.
NCBI ID   WP_101800511.1    Uniprot ID   -
Organism   Streptococcus anginosus strain UMB4708     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 729176..740180
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  F6I26_RS03680 (F6I26_003680) - 729994..732459 (+) 2466 WP_150888253.1 alkaline phosphatase family protein -
  F6I26_RS03685 (F6I26_003685) - 732828..733910 (-) 1083 WP_049516733.1 Xaa-Pro peptidase family protein -
  F6I26_RS03690 (F6I26_003690) ccpA 734176..735180 (+) 1005 WP_101800511.1 catabolite control protein A Regulator
  F6I26_RS03695 (F6I26_003695) - 735273..736271 (+) 999 WP_024051860.1 glycosyltransferase -
  F6I26_RS03700 (F6I26_003700) - 736273..737586 (+) 1314 WP_101800512.1 glycosyltransferase family 4 protein -
  F6I26_RS03705 (F6I26_003705) - 737613..737954 (+) 342 WP_101800513.1 hypothetical protein -
  F6I26_RS03710 (F6I26_003710) micA 738235..738936 (+) 702 WP_003025150.1 response regulator YycF Regulator

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 37011.11 Da        Isoelectric Point: 5.8260

>NTDB_id=840788 F6I26_RS03690 WP_101800511.1 734176..735180(+) (ccpA) [Streptococcus anginosus strain UMB4708]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITSSYFA
TLAKGIDDIAEMYKYNIVLANSDEDDDKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDNKQATMDAVERLTKNNQKIAFVSGPLVDDINGKIRLAGYKEALKKAKLTYSEGLVFESKYSYDDGYQLAERIIASK
ATAAFVTGDELAAGLLNCLSDKGVNVPEDFEIITSDDSQVARFTRPNLTTIGQPLYDLGAISMRMLTKIMHKEELEEREV
VLAHGLIERRSTRK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=840788 F6I26_RS03690 WP_101800511.1 734176..735180(+) (ccpA) [Streptococcus anginosus strain UMB4708]
ATGAACACAGATGATACTGTAACGATTTATGATGTCGCCCGTGAAGCGGGAGTTTCAATGGCAACCGTTAGCCGTGTGGT
AAATGGAAATAAAAATGTAAAGGAAAATACAAGAAAAAAAGTTTTGGAAGTGATTGACCGCCTTGATTATCGTCCAAATG
CAGTTGCTCGTGGACTTGCCAGTAAGAAAACGACAACAGTAGGAGTTGTCATTCCAAACATTACAAGCAGTTATTTTGCA
ACGCTTGCAAAAGGAATTGATGATATCGCAGAGATGTACAAATATAATATTGTCTTAGCCAATAGTGATGAAGATGATGA
CAAAGAAGTTTCTGTTGTCAATACGCTGTTCTCAAAACAAGTAGATGGTATCATTTTTATGGGCTATCATTTAACAGAAA
AGATTCGCTCCGAGTTTTCTCGTTCGCGGACGCCAGTTGTGCTTGCAGGCACAGTTGATGTGGAGCATCAATTACCAAGT
GTGAATATTGACAATAAGCAAGCAACCATGGATGCAGTTGAACGTCTTACGAAAAATAATCAAAAAATTGCTTTTGTAAG
CGGACCTTTGGTGGATGATATCAATGGTAAGATTCGTTTAGCTGGTTACAAAGAAGCTTTGAAGAAAGCTAAACTTACTT
ATAGTGAAGGATTGGTTTTTGAGTCAAAATACAGCTATGATGATGGTTATCAATTAGCAGAACGGATCATTGCTTCTAAA
GCTACAGCAGCTTTTGTGACTGGTGATGAGCTGGCGGCTGGGCTGTTAAATTGTTTATCAGACAAGGGTGTAAATGTACC
AGAAGACTTTGAAATCATCACTAGCGATGATTCACAAGTAGCACGCTTTACTCGTCCAAATTTGACAACTATTGGTCAGC
CTTTGTATGACCTTGGTGCGATTAGTATGCGCATGCTGACTAAGATTATGCACAAGGAAGAGCTAGAAGAACGCGAAGTG
GTATTAGCTCATGGCCTTATTGAGCGCCGTTCAACAAGGAAGTAG

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(181-332)

Bacterial regulatory proteins, lacI family (LacI)

(8-53)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

89.222

100

0.892
  ccpA Streptococcus pneumoniae D39

88.024

100

0.88
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.704

99.102

0.572