Detailed information NTG0083974

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: JN167_RS07440
• Genome accession: NZ_AP024201
• Coordinates: 1600559..1602760 (-)
• Length: 733 a.a.
• NCBI ID: WP_202257177.1
• Uniprot ID: -
• Organism: Staphylococcus argenteus strain Tokyo13069
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1595559..1607760

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JN167_RS07420 (TMSFP069_14490)	hemW	1595729..1596853 (-)	1125	WP_047526750.1	radical SAM family heme chaperone HemW	-
JN167_RS07425 (TMSFP069_14500)	lepA	1597058..1598881 (-)	1824	WP_000356945.1	translation elongation factor 4	-
JN167_RS07430 (TMSFP069_14510)	rpsT	1599227..1599478 (+)	252	WP_001274017.1	30S ribosomal protein S20	-
JN167_RS07435 (TMSFP069_14520)	holA	1599528..1600502 (-)	975	WP_047526755.1	DNA polymerase III subunit delta	-
JN167_RS07440 (TMSFP069_14530)	comEC	1600559..1602760 (-)	2202	WP_202257177.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
JN167_RS07445 (TMSFP069_14540)	-	1602765..1603226 (-)	462	WP_000439691.1	ComE operon protein 2	-
JN167_RS07450 (TMSFP069_14550)	comEA	1603318..1604019 (-)	702	WP_072292026.1	ComEA family DNA-binding protein	Machinery gene
JN167_RS07455 (TMSFP069_14560)	-	1604059..1604775 (-)	717	WP_047526761.1	class I SAM-dependent DNA methyltransferase	-
JN167_RS07460 (TMSFP069_14570)	rsfS	1604778..1605131 (-)	354	WP_001088023.1	ribosome silencing factor	-
JN167_RS07465 (TMSFP069_14580)	yqeK	1605132..1605716 (-)	585	WP_047430812.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
JN167_RS07470 (TMSFP069_14590)	-	1605706..1606275 (-)	570	WP_047526764.1	nicotinate-nucleotide adenylyltransferase	-
JN167_RS07475 (TMSFP069_14600)	yhbY	1606278..1606568 (-)	291	WP_000955238.1	ribosome assembly RNA-binding protein YhbY	-
JN167_RS07480 (TMSFP069_14610)	aroE	1606573..1607379 (-)	807	WP_047526766.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 733 a.a.
• Molecular weight: 84972.04 Da
• Isoelectric Point: 10.0998

>NTDB_id=83974 JN167_RS07440 WP_202257177.1 1600559..1602760(-) (comEC) [Staphylococcus argenteus strain Tokyo13069]
MLYVALSMIVGVLWNSSKVLSTFLFILLLFIAYRKNKIVYAPISLFLIIFSSWYLHYSQQAVFNYINYIERNPQFNERAQ
VIQIQRQDSDTYKGRLSLKNEIYPFFLTVKKNFDLKKIESRNCIVKGQFKVNDNKFVTLKLQSIVVQSCLKSNQSNLIEK
HKQFIMNRIYDSGIKFPDRIMALITGDVKEINEQFKERVKEIGIYHLLAVSGSHIAAIVFLIYQPLKRLNFPLFVIKGIT
IIVLALFAQYTNYAPSAVRAIIMTTLVLLITKQIKIKGIQLLAFTFIIMFILNPLVVYDIGFQFSFIISFFIMLLFPFLQ
QLSKLQSLFIITFIAQLASFIVAIPNFHQLQWVGFLSNLIFVPYYSIILFPLSILFFITSHFIVGLTPLNYFVDLSFNFH
DWLLDLFTRIKQSHFSIPKFNDWIFILFIISVYYIFWLLAKRKYRLVTFWTIIIMTLLITYPTNSHHKITMLNVGQGDSI
LYEGGKNQNVLIDTGGKVINDTKQPSFSISKYHILPTLNERGINELEYLILTHPHNDHIGEVEYIISHIKIKHIVIYNKG
YSSKTLLLLSKLSHKYNIKLMDVRQVSSFKLGDSSFQFFDSFIPNSRDKNEYSIITMITYQNKKALLMGDASKNNESLLL
KKYKLSEIDILKVGHHGSKTSSSKEFIEVIRPKISLISSGKNNMYHLPNIEVVKRLQGIRSRIYNSQQNGEVTIDLDENL
KVDSNSYGNASGL

Nucleotide

• Length: 2202 bp

>NTDB_id=83974 JN167_RS07440 WP_202257177.1 1600559..1602760(-) (comEC) [Staphylococcus argenteus strain Tokyo13069]
TTGCTGTATGTCGCATTATCAATGATTGTAGGAGTGCTTTGGAATTCTAGCAAAGTGCTCTCTACATTTCTTTTCATTTT
ACTTTTGTTTATTGCTTATCGTAAAAATAAAATAGTTTATGCTCCTATTTCTCTCTTTTTAATCATTTTTTCCTCATGGT
ATTTACATTATTCACAACAAGCAGTATTTAATTATATCAATTATATTGAACGTAATCCTCAGTTTAATGAGCGTGCTCAA
GTAATCCAAATTCAACGTCAAGATAGTGACACATATAAAGGTAGGTTGAGTTTAAAGAATGAAATATATCCTTTCTTTCT
AACAGTTAAAAAGAATTTTGATTTAAAGAAAATTGAAAGTCGTAATTGTATTGTTAAAGGACAATTCAAAGTTAATGACA
ACAAGTTTGTAACTCTTAAATTACAAAGTATAGTTGTACAAAGCTGTCTAAAATCGAACCAGTCTAATTTAATTGAGAAA
CATAAACAGTTTATAATGAATCGAATTTATGATTCGGGTATTAAGTTTCCAGATCGTATTATGGCATTGATTACTGGTGA
CGTAAAAGAAATTAATGAGCAATTTAAGGAACGTGTTAAAGAGATAGGTATATATCATTTGCTGGCAGTAAGTGGCTCGC
ATATAGCTGCCATTGTATTCTTAATTTACCAACCTTTAAAACGATTAAATTTTCCTTTATTTGTCATTAAAGGAATTACA
ATCATTGTATTAGCTTTGTTTGCTCAATACACAAATTATGCACCTAGTGCTGTAAGAGCTATAATAATGACAACACTAGT
ACTCCTTATTACTAAGCAAATTAAAATAAAGGGTATTCAGCTATTAGCATTTACTTTTATAATTATGTTTATTTTGAATC
CACTAGTTGTTTATGATATTGGATTTCAATTTTCATTCATCATTTCATTTTTTATTATGCTACTTTTTCCTTTTTTACAG
CAATTGTCAAAGTTACAATCATTATTCATAATTACTTTTATTGCACAATTAGCTTCATTTATCGTTGCCATTCCTAACTT
TCATCAACTTCAATGGGTGGGTTTTTTATCTAATTTGATTTTTGTACCGTACTATTCGATTATACTGTTTCCTCTATCAA
TTTTATTCTTTATTACAAGCCATTTTATTGTGGGCTTAACGCCGCTAAATTACTTTGTTGACCTAAGTTTCAATTTTCAT
GATTGGTTACTAGACCTATTCACTCGAATCAAGCAATCACATTTTTCTATTCCTAAGTTTAATGATTGGATATTTATATT
GTTTATAATTTCTGTTTATTACATATTTTGGTTATTGGCTAAACGTAAATATAGATTGGTTACGTTTTGGACTATAATTA
TTATGACATTATTAATAACATATCCAACAAATTCACATCACAAAATTACAATGTTAAATGTGGGGCAGGGAGATAGTATT
TTATATGAAGGCGGGAAGAACCAAAATGTCTTGATTGATACAGGTGGAAAAGTTATTAATGATACTAAACAACCTAGTTT
TTCAATTTCTAAATATCATATTTTACCAACGCTAAATGAAAGAGGGATAAATGAATTAGAGTATTTAATTTTAACACATC
CACACAATGACCATATTGGTGAAGTAGAATATATTATTAGTCATATTAAAATTAAGCATATAGTGATATACAATAAAGGA
TATAGTAGTAAAACATTGTTGTTATTATCAAAATTAAGCCATAAGTATAACATTAAACTTATGGATGTAAGACAAGTTAG
TAGTTTTAAACTTGGGGATAGTAGTTTTCAATTTTTTGATAGTTTTATTCCAAATAGCCGAGATAAAAATGAATACTCGA
TTATTACTATGATTACATATCAAAATAAAAAAGCTTTATTAATGGGTGATGCTAGTAAAAATAATGAATCTTTACTATTA
AAGAAATATAAATTGTCAGAGATTGATATTTTAAAAGTAGGACATCATGGAAGTAAGACAAGTAGTTCTAAAGAATTTAT
AGAAGTGATTAGGCCTAAAATAAGTTTGATTTCTTCTGGGAAGAACAATATGTATCATCTTCCTAACATAGAAGTTGTTA
AACGATTGCAAGGTATTCGCAGTCGCATTTACAATAGTCAACAAAACGGTGAAGTTACAATAGACTTAGATGAAAATTTA
AAAGTTGATTCAAACTCTTATGGAAATGCAAGTGGTTTATAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (183-441)

• Metallo-beta-lactamase superfamily (Lactamase_B) (474-679)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Staphylococcus aureus N315	95.634	100	0.956
comEC	Staphylococcus aureus MW2	95.362	100	0.954