Detailed information NTG0838904

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QPR36_RS16440
• Genome accession: NZ_CP126577
• Coordinates: 3370981..3372144 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain 411
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3365981..3377144

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QPR36_RS16410 (QPR36_16410)	-	3366246..3366665 (-)	420	WP_057080259.1	TIGR03826 family flagellar region protein	-
QPR36_RS16415 (QPR36_16415)	comFC	3366739..3367428 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
QPR36_RS16420 (QPR36_16420)	-	3367434..3367718 (-)	285	WP_057080260.1	competence protein ComFB	-
QPR36_RS16425 (QPR36_16425)	comFA	3367776..3369161 (-)	1386	WP_024085865.1	DEAD/DEAH box helicase	Machinery gene
QPR36_RS16430 (QPR36_16430)	-	3369269..3370117 (-)	849	WP_024085866.1	DegV family protein	-
QPR36_RS16435 (QPR36_16435)	degU	3370215..3370904 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
QPR36_RS16440 (QPR36_16440)	degS	3370981..3372144 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
QPR36_RS16445 (QPR36_16445)	-	3372366..3373013 (+)	648	WP_003151384.1	YigZ family protein	-
QPR36_RS16450 (QPR36_16450)	-	3373018..3374232 (+)	1215	WP_024085868.1	LCP family protein	-
QPR36_RS16455 (QPR36_16455)	-	3374322..3375398 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
QPR36_RS16460 (QPR36_16460)	-	3375531..3376727 (-)	1197	WP_079004918.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=838904 QPR36_RS16440 WP_003151385.1 3370981..3372144(-) (degS) [Bacillus velezensis strain 411]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=838904 QPR36_RS16440 WP_003151385.1 3370981..3372144(-) (degS) [Bacillus velezensis strain 411]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948