Detailed information NTG0838718

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: VJ737_RS27815
• Genome accession: NZ_CP141909
• Coordinates: 6103740..6105026 (+)
• Length: 428 a.a.
• NCBI ID: WP_184592647.1
• Uniprot ID: A0ABZ1NRP8
• Organism: Streptomyces sp. CGMCC 4.1772
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6098740..6110026

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VJ737_RS27780 (VJ737_27780)	-	6099299..6099352 (+)	54	Protein_5491	hypothetical protein	-
VJ737_RS27785 (VJ737_27785)	-	6099477..6099698 (+)	222	WP_324792424.1	hypothetical protein	-
VJ737_RS27800 (VJ737_27800)	tig	6100378..6101754 (+)	1377	WP_184592649.1	trigger factor	-
VJ737_RS27805 (VJ737_27805)	clpP	6102137..6102742 (+)	606	WP_167526581.1	ATP-dependent Clp protease proteolytic subunit	Regulator
VJ737_RS27810 (VJ737_27810)	clpP	6102852..6103559 (+)	708	WP_308431761.1	ATP-dependent Clp protease proteolytic subunit	Regulator
VJ737_RS27815 (VJ737_27815)	clpX	6103740..6105026 (+)	1287	WP_184592647.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
VJ737_RS27820 (VJ737_27820)	-	6105087..6106049 (-)	963	WP_184592645.1	hypothetical protein	-
VJ737_RS27825 (VJ737_27825)	-	6106187..6108817 (+)	2631	WP_184592643.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46855.63 Da
• Isoelectric Point: 4.7360

>NTDB_id=838718 VJ737_RS27815 WP_184592647.1 6103740..6105026(+) (clpX) [Streptomyces sp. CGMCC 4.1772]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGANGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGAQIRSKREMESKDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVQSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=838718 VJ737_RS27815 WP_184592647.1 6103740..6105026(+) (clpX) [Streptomyces sp. CGMCC 4.1772]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCTGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTGGCGGAGACCA
GCGAGGTCCGCTGGGAGGAACTCCCGAAGCCTCGCGAGATCTACGAGTTCCTCGAGGGATACGTGGTCGGCCAGGAGGCC
GCCAAGAAGGCCCTCTCCGTAGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGGGCGAACGGCCG
TGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTCCTCGGCCCCACGGGCTCCGGGAAGACCCTCCTCGCGCAGA
CCCTCGCGCGCATGCTGAACGTCCCCTTCGCGATCGCCGACGCCACGGCGCTGACGGAGGCGGGATACGTCGGCGAGGAC
GTCGAGAACATCCTCCTCAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
TGAGATCGACAAGGTCGCGAGGAAGAGTGAAAACCCGTCGATCACGCGCGACGTGAGCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTCGAGGGCACCACGGCCTCGGTCCCGCCGCAGGGCGGCCGTAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCCGGACTGGAGAAGATCATCGAGTCCCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGCAGATCCGCTCCAAGCGCGAGATGGAGTCCAAGGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTGCCGGTCATCACCTCGGTCCACAACCTCGACCGC
GAGGCCCTGCTGCAGATCCTCATCGAGCCGCGCAACGCGCTCGTCAAGCAGTACGAGCGCCTCTTCGAACTGGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTCGAGGCCATCGCCGACCAGGCGATCCTCCGCCAGACCGGCGCGCGTGGCCTGC
GGGCCATCATGGAGGAGGTCCTCCAGGGCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGGGTCGTCATCACG
GCGGACGTCGTCCAGTCGAACGTCAACCCGACGCTGATTCCGCGGGATGCGCGGGGGCGCGGGCCGGGGGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.925	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521