Detailed information NTG0838517

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QPL78_RS17910
• Genome accession: NZ_CP126530
• Coordinates: 3484707..3485864 (-)
• Length: 385 a.a.
• NCBI ID: WP_024123030.1
• Uniprot ID: A0A9Q6F2U6
• Organism: Bacillus halotolerans strain Tehuacan_S4
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3479707..3490864

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QPL78_RS17880 (QPL78_17880)	-	3479961..3480380 (-)	420	WP_024123026.1	TIGR03826 family flagellar region protein	-
QPL78_RS17885 (QPL78_17885)	comFC	3480454..3481176 (-)	723	WP_284559812.1	phosphoribosyltransferase family protein	Machinery gene
QPL78_RS17890 (QPL78_17890)	-	3481140..3481436 (-)	297	WP_059292436.1	competence protein ComFB	-
QPL78_RS17895 (QPL78_17895)	comFA	3481493..3482887 (-)	1395	WP_284559813.1	ATP-dependent helicase ComFA	Machinery gene
QPL78_RS17900 (QPL78_17900)	-	3482994..3483839 (-)	846	WP_101864688.1	DegV family protein	-
QPL78_RS17905 (QPL78_17905)	degU	3483935..3484624 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
QPL78_RS17910 (QPL78_17910)	degS	3484707..3485864 (-)	1158	WP_024123030.1	two-component sensor histidine kinase DegS	Regulator
QPL78_RS17915 (QPL78_17915)	-	3486081..3486734 (+)	654	WP_101859864.1	YigZ family protein	-
QPL78_RS17920 (QPL78_17920)	-	3486734..3487912 (+)	1179	WP_284559814.1	LCP family protein	-
QPL78_RS17925 (QPL78_17925)	-	3487988..3489064 (-)	1077	WP_010332075.1	MraY family glycosyltransferase	-
QPL78_RS17930 (QPL78_17930)	-	3489208..3490398 (-)	1191	WP_284560797.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44871.71 Da
• Isoelectric Point: 6.7798

>NTDB_id=838517 QPL78_RS17910 WP_024123030.1 3484707..3485864(-) (degS) [Bacillus halotolerans strain Tehuacan_S4]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTEDKRLAPQFEVALFRLAQEAVSNALKHSGSEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=838517 QPL78_RS17910 WP_024123030.1 3484707..3485864(-) (degS) [Bacillus halotolerans strain Tehuacan_S4]
ATGAATAAAACAAAGATGGATTCCAAAGTTCTGGACTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
TGAGGTTTTTCAAATCGGAGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TTTATGAAGTCATCGAGCTTGGTGATAAACTTGAAGTGCAAACCCGCCATGCGCGAAACCGTTTATCCGAGGTCAGCCGC
AATTTTCATAGATTCAGTGAAGAAGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAAGTAGAACTGACAATGAT
CCAGCAGCGTGAAAAGCAATTGCGCGAACGCCGGGACGATTTGGAACGCAGACTGTTAGGCCTTCAGGAAATCATCGAAC
GCTCAGAATCACTAGTGAGCCAGATTACGGTCGTGCTGAACTATCTGAATCAGGATCTTCGGGAGGTTGGGCTGCTTCTT
GCCGATGCACAGGCAAAACAGGATTTTGGCTTGAGAATTATTGAAGCGCAGGAAGAAGAGAGAAAAAGAGTCTCGAGAGA
AATTCACGATGGCCCTGCACAAATGCTGGCAAATGTTATGATGAGATCGGAATTAATTGAACGGATTTTCAGAGACCGAG
GCGCTGAAGACGGATTCCAGGAAATCAAAAATCTCCGCCAAAATGTGCGAAATGCTCTTTACGAAGTGAGACGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACTTAGGCCTGATTCCAACTTTGCGGAAATATCTATATACAACCGAAGAATA
TAACGGTAAGGTGAAAATACATTTTCAGTGCATCGGCGATACGGAGGACAAACGACTCGCGCCTCAGTTTGAAGTTGCGC
TCTTCAGACTCGCACAGGAAGCTGTATCCAATGCGTTAAAGCATTCTGGATCTGAAGAAATTACAGTCAAAGTTGAGATT
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGCAAAGGATTTGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTTGGAATGAAAGAAAGAGTAGATTTATTGGAAGGGACCATGACTATAGATTCGAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	99.221	100	0.992