Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   QPL78_RS15960 Genome accession   NZ_CP126530
Coordinates   3094080..3096386 (-) Length   768 a.a.
NCBI ID   WP_059292643.1    Uniprot ID   -
Organism   Bacillus halotolerans strain Tehuacan_S4     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3089080..3101386
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPL78_RS15920 (QPL78_15920) - 3089548..3089979 (+) 432 WP_024122673.1 Na(+)/H(+) antiporter subunit B -
  QPL78_RS15925 (QPL78_15925) - 3089979..3090320 (+) 342 WP_024122674.1 Na(+)/H(+) antiporter subunit C -
  QPL78_RS15930 (QPL78_15930) - 3090313..3091794 (+) 1482 WP_101864139.1 Na+/H+ antiporter subunit D -
  QPL78_RS15935 (QPL78_15935) - 3091800..3092276 (+) 477 WP_101864138.1 Na+/H+ antiporter subunit E -
  QPL78_RS15940 (QPL78_15940) - 3092276..3092560 (+) 285 WP_024122677.1 Na(+)/H(+) antiporter subunit F1 -
  QPL78_RS15945 (QPL78_15945) mnhG 3092544..3092918 (+) 375 WP_059292644.1 monovalent cation/H(+) antiporter subunit G -
  QPL78_RS15950 (QPL78_15950) - 3092957..3093337 (-) 381 WP_024122679.1 hotdog fold thioesterase -
  QPL78_RS15955 (QPL78_15955) comA 3093355..3093999 (-) 645 WP_101864137.1 two-component system response regulator ComA Regulator
  QPL78_RS15960 (QPL78_15960) comP 3094080..3096386 (-) 2307 WP_059292643.1 histidine kinase Regulator
  QPL78_RS15965 (QPL78_15965) comX 3096402..3096623 (-) 222 WP_059292642.1 competence pheromone ComX -
  QPL78_RS15970 (QPL78_15970) - 3096620..3097489 (-) 870 WP_101864136.1 polyprenyl synthetase family protein -
  QPL78_RS15975 (QPL78_15975) degQ 3097674..3097814 (-) 141 WP_024122683.1 degradation enzyme regulation protein DegQ Regulator
  QPL78_RS15980 (QPL78_15980) - 3098275..3098643 (+) 369 WP_024122684.1 hypothetical protein -
  QPL78_RS15985 (QPL78_15985) - 3098619..3099848 (-) 1230 WP_024122685.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 89297.39 Da        Isoelectric Point: 8.0083

>NTDB_id=838510 QPL78_RS15960 WP_059292643.1 3094080..3096386(-) (comP) [Bacillus halotolerans strain Tehuacan_S4]
MHINNNVYKYLSLAFIILSFVYVIYLSYISVFNIFVGADVKINEQGKLEVTKVVDYEYYSGVKKGDIILEVNGQRGSEIQ
LESGRLVNVESLTVERDNKSFHLQNVSLISEENLFMYLIPLISYSICLFCIFFVYRINKVRKSSSAFVLILFLLFVSVAY
VSACGARRGEEVSTYLLVLTLVSCPILYIHFIYKYFAELGTKLFKKKILIIMYILPLVNLLLEAVLSNRLNSSAFLSNLN
LISFFVLVLTVSILIHQGIRKIKQNEQKSILKILAYINILSFSPFIIFFVIPYVLFDKYLSPFSLAAFTLVIPFSLVYQF
MTNRLYNIDFVVGRLKYYGFLAITPTVIVVTIFNYIQKPEDNFYYVKLTFVIYLLMFAVFYFKEIIDFRFKLKRFTEKFN
YQDGIFKFTQLIKQASSVDQVLNYFKNTILEVLNIDNACVYDNSKGEITLLSKNNFKDLTYKNHEQYVKNFSGDIGKIKE
FKQGFIIKIGERGDRSFLVLCFSSYNTFKLTRDEIAWLQTLAFYTNVSLENVMKIEELMVHLEDLKQQESNPVWLKKLMY
TIEEKQRSDLARDLHDSVLQDLISLKRQCELFLAEFKKDDDPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDL
GLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATEVLIMLISIQNKIVLHYEDDGV
GFDLEKNNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=838510 QPL78_RS15960 WP_059292643.1 3094080..3096386(-) (comP) [Bacillus halotolerans strain Tehuacan_S4]
ATGCACATAAATAATAACGTCTATAAATATTTGTCTCTAGCTTTTATCATTTTAAGTTTTGTTTATGTGATCTACCTCTC
TTATATTTCTGTTTTTAATATCTTTGTAGGTGCAGATGTGAAGATTAATGAACAGGGTAAGTTAGAGGTTACCAAAGTTG
TGGATTATGAATATTATTCAGGTGTAAAAAAAGGTGACATCATTCTTGAAGTGAATGGGCAAAGAGGAAGCGAAATCCAG
TTAGAGAGCGGAAGATTGGTCAATGTAGAAAGCTTAACTGTTGAGAGAGATAATAAATCATTTCATTTACAAAATGTAAG
CCTAATCAGTGAAGAAAATTTATTTATGTATCTCATTCCACTCATATCTTATTCAATCTGTTTATTTTGTATATTTTTTG
TTTACAGAATAAATAAAGTAAGAAAATCATCTTCTGCTTTTGTTTTAATCTTATTTTTGTTATTTGTATCAGTAGCATAT
GTAAGTGCCTGCGGGGCAAGAAGAGGTGAAGAGGTTAGCACTTACCTGCTTGTCCTTACTTTAGTAAGTTGTCCAATTTT
ATATATACATTTCATATATAAATACTTTGCGGAATTGGGCACTAAGTTATTCAAAAAGAAGATTTTAATCATAATGTATA
TACTTCCACTCGTAAACCTGTTACTAGAAGCTGTTTTGAGTAATAGATTAAATTCTTCGGCTTTTTTGTCTAACTTGAAC
TTGATTTCCTTTTTTGTCCTAGTCCTTACTGTATCTATCCTTATCCATCAAGGGATTAGAAAAATCAAACAAAATGAGCA
AAAGTCAATTTTAAAAATCCTTGCTTATATAAATATCCTGTCTTTTAGTCCCTTTATTATCTTTTTTGTTATTCCCTATG
TGTTGTTTGATAAGTATCTTTCACCCTTTAGTTTGGCAGCTTTTACACTTGTTATACCTTTTTCTTTAGTGTATCAATTT
ATGACAAATAGACTTTATAATATTGACTTTGTTGTAGGACGGCTTAAATACTATGGATTTTTAGCCATTACACCTACTGT
TATTGTGGTCACCATATTTAATTACATTCAAAAACCAGAAGATAACTTTTACTACGTTAAACTAACATTTGTAATATATT
TGCTTATGTTTGCTGTCTTTTACTTTAAAGAAATCATTGATTTTCGTTTCAAGTTGAAAAGATTTACAGAGAAATTTAAT
TATCAAGATGGAATTTTTAAATTTACTCAGTTGATTAAGCAAGCATCATCAGTAGATCAAGTACTTAATTACTTTAAAAA
TACAATCCTAGAAGTATTAAACATAGATAATGCTTGCGTGTATGATAATTCTAAAGGGGAAATCACCCTTCTTAGTAAGA
ACAACTTTAAAGATTTGACTTATAAAAATCATGAGCAATATGTGAAAAATTTTTCTGGTGATATCGGTAAAATTAAAGAG
TTTAAACAAGGTTTTATTATTAAAATAGGTGAACGAGGAGACAGATCATTTTTAGTACTCTGTTTCTCAAGTTATAATAC
TTTTAAATTAACAAGGGATGAAATTGCATGGCTTCAAACATTAGCGTTTTATACAAATGTCTCATTGGAAAACGTTATGA
AAATCGAAGAATTGATGGTGCATCTTGAGGATTTAAAACAACAAGAATCCAACCCGGTATGGCTCAAAAAACTCATGTAC
ACCATCGAAGAAAAACAACGTTCTGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCATTAAAACG
GCAGTGTGAGCTGTTTTTGGCTGAGTTTAAGAAGGATGATGATCCATGCCGTGAAGAGGTGCAGGACAAGCTCGTACAGA
TGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAATTGCGGCCGCAGCTTTTGTATGATTTG
GGACTGGTGAAGGCGCTGTCCAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGCTTAAATACCGGCAG
ATTTACGGCGTCGCTTGATTTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTTTATCGAATGCAGTGAAAC
ACTCTCAGGCGACGGAAGTGCTTATCATGCTGATCAGTATTCAGAACAAAATTGTTCTTCATTATGAGGACGATGGTGTC
GGATTTGATCTAGAGAAAAATAACGAACATTCCATGAGTATGGGTCTTTCTGGCATTAAGGAGCGAGTCAGGGCTTTAGA
TGGACGCCTCCGAATCGAAACAAGTGAAGGAAAGGGCTTTAAGGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

55.137

100

0.552