Detailed information NTG0083831

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: ALDI51_RS18660
• Genome accession: NZ_AP024172
• Coordinates: 3946118..3947242 (+)
• Length: 374 a.a.
• NCBI ID: WP_201396113.1
• Uniprot ID: -
• Organism: Alicycliphilus denitrificans strain I51
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3941118..3952242

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ALDI51_RS18635 (ALDI51_36870)	-	3941420..3941734 (+)	315	WP_094438110.1	BON domain-containing protein	-
ALDI51_RS18640 (ALDI51_36880)	coaD	3941818..3942306 (-)	489	WP_201396109.1	pantetheine-phosphate adenylyltransferase	-
ALDI51_RS18645 (ALDI51_36890)	rsmD	3942434..3943024 (-)	591	WP_201396110.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
ALDI51_RS18650 (ALDI51_36900)	-	3943021..3944379 (-)	1359	WP_201396111.1	M16 family metallopeptidase	-
ALDI51_RS18655 (ALDI51_36910)	-	3944658..3946088 (-)	1431	WP_201396112.1	M16 family metallopeptidase	-
ALDI51_RS18660 (ALDI51_36920)	pilA	3946118..3947242 (+)	1125	WP_201396113.1	signal recognition particle-docking protein FtsY	Machinery gene
ALDI51_RS18665 (ALDI51_36930)	-	3947258..3948211 (-)	954	WP_201396114.1	LysR family transcriptional regulator	-
ALDI51_RS18670 (ALDI51_36940)	-	3948327..3949265 (+)	939	WP_201396115.1	dihydrodipicolinate synthase family protein	-
ALDI51_RS18675 (ALDI51_36950)	-	3949303..3950268 (+)	966	WP_201398525.1	Bug family tripartite tricarboxylate transporter substrate binding protein	-
ALDI51_RS18680 (ALDI51_36960)	-	3950258..3950962 (+)	705	WP_201396116.1	SDR family NAD(P)-dependent oxidoreductase	-
ALDI51_RS18685 (ALDI51_36970)	-	3950989..3952155 (+)	1167	WP_201396117.1	mandelate racemase/muconate lactonizing enzyme family protein	-

Sequence

Protein

• Length: 374 a.a.
• Molecular weight: 39062.58 Da
• Isoelectric Point: 5.9996

>NTDB_id=83831 ALDI51_RS18660 WP_201396113.1 3946118..3947242(+) (pilA) [Alicycliphilus denitrificans strain I51]
MFSFFKKKSPSPAEPSSAPAPDAASAPPADAPTGGGALGWLRKSFGAQDAAAPQAAPAADEAPPAVPEPAPKPEGARQGW
MDRLKSGLRKTGGSIATVFTGTQINDALYEELEDALLMADTGVKATQHLLADLRRRVKEAKATEPAAVKALLADALADLL
RPLEKPLVIGEHQPTVIMVAGVNGAGKTTSIGKLTRHLADHGESVLLAAADTFRAAAREQLGVWATRNTVEIISQEGGDP
AAVSFDAVTAGRARGKDVVLVDTAGRLPTQLHLMEELRKIKRVVTKADATAPHEVLLVIDGNTGQNALAQVRAFDDALQL
TGLIVTKLDGTAKGGVLAAIAQERPVPVYFIGVGEKVEDLETFNAREFAQALLA

Nucleotide

• Length: 1125 bp

>NTDB_id=83831 ALDI51_RS18660 WP_201396113.1 3946118..3947242(+) (pilA) [Alicycliphilus denitrificans strain I51]
ATGTTCAGTTTTTTCAAGAAGAAATCCCCCTCCCCCGCCGAGCCGTCCAGCGCGCCGGCGCCGGATGCCGCCAGCGCCCC
CCCGGCCGACGCGCCCACGGGCGGCGGCGCGCTCGGCTGGCTGCGCAAGTCCTTCGGCGCACAGGACGCCGCCGCGCCGC
AAGCCGCGCCCGCGGCGGACGAGGCCCCGCCCGCCGTGCCCGAGCCCGCCCCCAAGCCCGAGGGCGCGCGCCAGGGCTGG
ATGGACCGCCTCAAGTCCGGCCTGCGCAAGACCGGCGGCAGCATCGCCACCGTCTTCACGGGCACGCAGATCAACGACGC
GCTGTACGAGGAGCTCGAAGACGCCCTGCTCATGGCCGACACCGGCGTGAAGGCCACGCAGCACCTGCTGGCCGACCTCA
GGCGCCGCGTGAAGGAGGCCAAGGCCACCGAGCCCGCCGCCGTCAAGGCCCTGCTGGCCGACGCGCTGGCCGACCTGCTG
CGCCCGCTGGAAAAGCCCCTGGTCATCGGCGAGCACCAGCCCACCGTGATCATGGTGGCCGGCGTGAACGGCGCGGGCAA
GACCACGTCAATCGGCAAGCTCACCAGGCACCTGGCCGACCACGGCGAGAGCGTGCTGCTGGCCGCGGCCGACACCTTCC
GCGCCGCGGCGCGCGAGCAGCTCGGCGTCTGGGCCACGCGCAATACGGTGGAGATCATCAGCCAGGAAGGGGGCGACCCC
GCCGCCGTGAGCTTCGACGCCGTCACCGCCGGCCGCGCGCGCGGCAAGGACGTGGTGCTGGTGGACACGGCCGGGCGCCT
GCCCACGCAGCTGCACCTGATGGAGGAGCTCAGGAAGATCAAGCGCGTCGTAACCAAGGCCGACGCGACGGCCCCGCACG
AGGTGCTGCTGGTGATCGACGGCAACACCGGCCAGAACGCCCTGGCCCAGGTGCGCGCGTTCGACGACGCGCTGCAGCTC
ACCGGCCTCATCGTCACCAAGCTCGACGGCACGGCCAAGGGCGGCGTGCTGGCCGCCATCGCACAGGAGCGGCCCGTGCC
CGTCTACTTCATCGGCGTGGGCGAGAAGGTGGAAGACCTGGAGACCTTCAACGCGCGCGAGTTCGCGCAGGCGCTGCTGG
CCTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (174-373)

• SRP54-type protein, helical bundle domain (SRP54_N) (93-156)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	49.519	100	0.551