Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ALDI51_RS19225 Genome accession   NZ_AP024172
Coordinates   4063358..4063762 (-) Length   134 a.a.
NCBI ID   WP_013520430.1    Uniprot ID   A0A420KBZ9
Organism   Alicycliphilus denitrificans strain I51     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4058358..4068762
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ALDI51_RS19210 (ALDI51_38010) - 4060164..4062428 (-) 2265 WP_201396174.1 methyl-accepting chemotaxis protein -
  ALDI51_RS19215 (ALDI51_38020) - 4062449..4062976 (-) 528 WP_013520428.1 chemotaxis protein CheW -
  ALDI51_RS19220 (ALDI51_38030) - 4062993..4063358 (-) 366 WP_013520429.1 response regulator -
  ALDI51_RS19225 (ALDI51_38040) pilG 4063358..4063762 (-) 405 WP_013520430.1 response regulator Regulator
  ALDI51_RS19230 - 4063814..4063987 (-) 174 WP_201396175.1 rubredoxin -
  ALDI51_RS19235 (ALDI51_38050) thiD 4064127..4065029 (+) 903 WP_201396176.1 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase -
  ALDI51_RS19240 (ALDI51_38060) hemL 4065013..4066317 (+) 1305 WP_059401415.1 glutamate-1-semialdehyde 2,1-aminomutase -
  ALDI51_RS19245 (ALDI51_38070) purH 4066419..4068023 (-) 1605 WP_201398532.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase -
  ALDI51_RS19250 (ALDI51_38080) - 4068099..4068335 (-) 237 WP_013520435.1 Fis family transcriptional regulator -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14827.06 Da        Isoelectric Point: 7.7124

>NTDB_id=83832 ALDI51_RS19225 WP_013520430.1 4063358..4063762(-) (pilG) [Alicycliphilus denitrificans strain I51]
MATTTTGSTFKVLVVDDSNTIRRSAEIFLKQGGHEVLLADDGFDALAKVNDYRPQLIFCDILMPKLDGYQTCAIIKRNAR
FADTPVVMLSSKDGVFDKARGRMVGCQEYLTKPFTKDQLLQAVQQFGNAQQGAM

Nucleotide


Download         Length: 405 bp        

>NTDB_id=83832 ALDI51_RS19225 WP_013520430.1 4063358..4063762(-) (pilG) [Alicycliphilus denitrificans strain I51]
TTGGCTACGACGACAACCGGTTCCACCTTCAAGGTCCTCGTGGTGGACGATAGCAACACCATCCGGCGCAGCGCCGAAAT
CTTCCTCAAGCAGGGCGGCCACGAGGTGCTGCTCGCGGACGACGGCTTCGACGCCCTGGCCAAGGTCAACGATTACCGGC
CCCAGCTGATCTTCTGCGACATCCTGATGCCCAAGCTCGACGGCTATCAGACCTGCGCCATCATCAAGCGCAACGCCCGT
TTCGCCGATACGCCGGTGGTCATGCTGTCGTCCAAGGACGGCGTCTTCGACAAGGCGCGCGGCCGCATGGTCGGCTGCCA
GGAATACCTCACCAAGCCATTCACCAAAGACCAGTTGCTGCAGGCCGTGCAGCAATTCGGAAATGCGCAACAAGGAGCCA
TGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(12-124)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A420KBZ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

57.265

87.313

0.5

Multiple sequence alignment