Detailed information NTG0838217

Bioinformatically predicted

Overview

• Name: pptB
• Type: Regulator
• Locus tag: VF946_RS09775
• Genome accession: NZ_CP141824
• Coordinates: 1930088..1931128 (-)
• Length: 346 a.a.
• NCBI ID: WP_012775685.1
• Uniprot ID: A0A0H3MX50
• Organism: Streptococcus suis strain HB18
• Function: export ComS (predicted from homology) Competence regulation

Genomic Context

Location: 1925088..1936128

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VF946_RS09745	-	1925744..1926052 (-)	309	WP_002942377.1	YlxQ-related RNA-binding protein	-
VF946_RS09750	rnpM	1926039..1926335 (-)	297	WP_002942375.1	RNase P modulator RnpM	-
VF946_RS09755	nusA	1926352..1927494 (-)	1143	WP_004194726.1	transcription termination factor NusA	-
VF946_RS09760	rimP	1927568..1928038 (-)	471	WP_002942369.1	ribosome maturation factor RimP	-
VF946_RS09765	trmB	1928609..1929247 (-)	639	WP_002939002.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	-
VF946_RS09770	ccrZ	1929244..1930038 (-)	795	WP_002942360.1	cell cycle regulator CcrZ	-
VF946_RS09775	pptB	1930088..1931128 (-)	1041	WP_012775685.1	ABC transporter permease	Regulator
VF946_RS09780	pptA	1931125..1931859 (-)	735	WP_012027751.1	ABC transporter ATP-binding protein	Regulator
VF946_RS09785	-	1931922..1932335 (+)	414	WP_012027752.1	HIT family protein	-
VF946_RS09790	-	1932337..1932639 (+)	303	WP_012027753.1	methyl-accepting chemotaxis protein	-
VF946_RS09795	-	1932748..1933941 (-)	1194	WP_012027754.1	LCP family protein	-
VF946_RS09800	-	1933938..1934465 (-)	528	WP_012775687.1	GNAT family N-acetyltransferase	-
VF946_RS09805	tsaE	1934458..1934898 (-)	441	WP_074389748.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 40177.55 Da
• Isoelectric Point: 10.1278

>NTDB_id=838217 VF946_RS09775 WP_012775685.1 1930088..1931128(-) (pptB) [Streptococcus suis strain HB18]
MKELFQQRRLDFLNRCSKYLRYVLNDHFVLVLMVLLGFLSLQYRQLLLSFPENPLPIVLVVIAISLLVLLSGRIATYLEE
ADQIFLLTKEKDILQGLEVAARRTVLFWSSIQVVVQLVLLPIYLKLGLPVWMIVSGLLTLLVLKCLFVKRQLVAYQSQGV
LDWSKAIQDEQKRKQSILRFFALFTTVKGISTTVKPRSYLNGILRLVKSRQTWFYLYLRAFLRSGDYLGLTIRLLLLAIL
SLFAIEESWLSIGLVLVFHYLLVFQLLGLYKHYDYQYITQLYPLEKDSKKIGLQNLLRVILYSLLVVELGFALLFSKENA
MVVVLLLVGIFLHEIYLPLKLKKLID

Nucleotide

• Length: 1041 bp

>NTDB_id=838217 VF946_RS09775 WP_012775685.1 1930088..1931128(-) (pptB) [Streptococcus suis strain HB18]
ATGAAAGAATTGTTTCAACAACGCCGACTAGATTTTTTAAATCGTTGTTCCAAGTATCTGCGCTATGTTCTGAATGACCA
TTTTGTTTTGGTTCTCATGGTTTTATTAGGCTTTTTGAGTTTGCAATATCGTCAATTATTGTTGTCATTCCCTGAGAATC
CGTTGCCGATTGTTTTGGTGGTTATTGCAATCAGTCTACTGGTGCTATTGTCCGGAAGAATTGCGACTTATTTAGAAGAA
GCTGATCAAATCTTCCTATTGACCAAGGAAAAAGACATTCTGCAAGGACTCGAGGTTGCAGCCAGACGCACGGTCTTGTT
TTGGTCCTCTATACAGGTGGTGGTTCAGCTTGTTTTGTTACCAATCTATTTGAAACTGGGTTTACCGGTGTGGATGATTG
TATCTGGTCTTCTTACTTTGTTGGTTTTAAAATGTCTTTTTGTCAAGCGCCAATTAGTGGCTTATCAGTCACAGGGAGTA
TTGGACTGGTCTAAGGCTATTCAAGATGAACAAAAAAGGAAACAGTCTATTTTACGTTTCTTTGCCTTATTTACAACGGT
TAAAGGAATCAGTACGACTGTTAAACCGAGAAGCTATCTCAATGGAATCTTGCGTCTCGTCAAGTCGAGACAGACTTGGT
TTTATCTCTACTTACGGGCTTTCTTGCGTTCAGGAGACTACTTGGGCTTGACGATACGTCTACTGTTGTTGGCGATTTTG
TCCCTATTTGCCATTGAAGAATCGTGGTTATCCATCGGCCTAGTTTTAGTCTTTCATTATTTGCTTGTCTTCCAGTTGTT
GGGGCTTTACAAGCATTATGATTATCAATATATAACACAACTGTATCCTCTGGAGAAAGATTCCAAGAAAATTGGTCTTC
AGAATTTGCTTAGAGTGATTTTATATAGTCTATTAGTAGTGGAATTGGGCTTTGCTCTGCTATTTTCTAAAGAGAATGCG
ATGGTAGTCGTCTTACTTCTCGTGGGGATTTTCTTGCATGAAATATATTTGCCTCTAAAATTAAAAAAATTGATTGACTA
A

Domains

Predicted by InterProScan.

• Bacterial ABC transporter protein EcsB (EcsB) (154-329)

• Bacterial ABC transporter protein EcsB (EcsB) (2-158)

3D structure

• AlphaFold DB: A0A0H3MX50

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pptB	Streptococcus salivarius strain HSISS4	46.023	100	0.468
pptB	Streptococcus thermophilus LMD-9	45.455	100	0.462