Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   QPL80_RS21520 Genome accession   NZ_CP126515
Coordinates   4029302..4030096 (-) Length   264 a.a.
NCBI ID   WP_003161566.1    Uniprot ID   P52928
Organism   Bacillus anthracis strain Mn106-1 head2 chi     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 4024302..4035096
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QPL80_RS21500 (QPL80_21550) - 4026105..4026338 (+) 234 WP_001190191.1 DUF2627 domain-containing protein -
  QPL80_RS21505 (QPL80_21555) - 4026387..4027115 (-) 729 WP_071728403.1 glycerophosphodiester phosphodiesterase -
  QPL80_RS21510 (QPL80_21560) - 4027166..4027312 (+) 147 WP_001247671.1 YycC family protein -
  QPL80_RS21515 (QPL80_21565) - 4027480..4029006 (-) 1527 WP_284565687.1 glycosyltransferase family 39 protein -
  QPL80_RS21520 (QPL80_21570) spo0A 4029302..4030096 (-) 795 WP_003161566.1 sporulation transcription factor Spo0A Regulator
  QPL80_RS21525 (QPL80_21575) spoIVB 4030384..4031682 (-) 1299 WP_002054681.1 SpoIVB peptidase -
  QPL80_RS21530 (QPL80_21580) recN 4031801..4033540 (-) 1740 WP_000947757.1 DNA repair protein RecN Machinery gene
  QPL80_RS21535 (QPL80_21585) argR 4033808..4034257 (-) 450 WP_001032581.1 arginine repressor ArgR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29440.17 Da        Isoelectric Point: 7.4718

>NTDB_id=838218 QPL80_RS21520 WP_003161566.1 4029302..4030096(-) (spo0A) [Bacillus anthracis strain Mn106-1 head2 chi]
MEKIKVCLVDDNKELVSMLESYVAAQDDMEVIGTAYNGQECLNLLKDKQPDVLVLDIIMPHLDGLAVLEKMRHIERLRQP
SVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLTSHIRQVSGKANATIKRPLPSFRSATTVDGKPKNLDASITSIIHE
IGVPAHIKGYMYLREAISMVYNDIELLGSITKVLYPDIAKKYNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTVSMS
KAKPTNSEFIAMVADKLRLEHKAS

Nucleotide


Download         Length: 795 bp        

>NTDB_id=838218 QPL80_RS21520 WP_003161566.1 4029302..4030096(-) (spo0A) [Bacillus anthracis strain Mn106-1 head2 chi]
GTGGAGAAAATTAAAGTATGTCTTGTGGATGATAATAAAGAATTAGTATCAATGCTAGAGAGTTATGTAGCTGCTCAAGA
TGATATGGAAGTAATCGGTACTGCTTATAATGGTCAAGAGTGTTTAAATTTATTAAAAGATAAACAGCCAGATGTACTCG
TATTAGATATTATTATGCCACATTTAGATGGTTTAGCTGTACTAGAGAAAATGCGACATATTGAAAGGTTAAGACAGCCT
AGCGTAATTATGTTGACAGCATTTGGACAAGAAGATGTGACGAAAAAAGCAGTTGACTTAGGTGCTTCATATTTTATATT
AAAACCATTTGATATGGAGAATTTAACTAGTCATATTCGTCAAGTGAGCGGTAAAGCGAACGCTACTATTAAACGTCCAC
TGCCATCTTTCCGATCAGCAACAACAGTAGATGGAAAACCGAAAAACTTAGACGCGAGCATTACGAGTATCATTCATGAA
ATTGGTGTGCCTGCTCATATTAAAGGATACATGTACTTAAGGGAAGCAATTTCTATGGTGTACAATGACATCGAATTACT
TGGATCTATTACGAAAGTATTGTATCCAGATATCGCGAAGAAATATAATACAACAGCAAGCCGCGTTGAGCGTGCAATCC
GTCACGCAATTGAAGTAGCATGGAGTCGTGGGAATATTGATTCTATTTCGTCCTTATTCGGTTATACAGTATCCATGTCA
AAAGCAAAACCTACGAACTCCGAGTTTATTGCAATGGTTGCGGATAAGCTTAGACTTGAACATAAGGCTAGCTGA

Domains

Predicted by InterproScan.

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(154-257)

Response regulator receiver domain (Response_reg)

(6-119)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P52928

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

80.899

100

0.818