Detailed information NTG0837211

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QNM98_RS17390
• Genome accession: NZ_CP126226
• Coordinates: 3520870..3522033 (-)
• Length: 387 a.a.
• NCBI ID: WP_007407484.1
• Uniprot ID: A3KLC1
• Organism: Bacillus velezensis strain B31
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3515870..3527033

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNM98_RS17360 (QNM98_17360)	-	3516135..3516554 (-)	420	WP_015418333.1	TIGR03826 family flagellar region protein	-
QNM98_RS17365 (QNM98_17365)	comFC	3516628..3517317 (-)	690	WP_196493397.1	phosphoribosyltransferase family protein	Machinery gene
QNM98_RS17370 (QNM98_17370)	-	3517323..3517607 (-)	285	WP_003151389.1	competence protein ComFB	-
QNM98_RS17375 (QNM98_17375)	comFA	3517665..3519050 (-)	1386	WP_015418335.1	DEAD/DEAH box helicase	Machinery gene
QNM98_RS17380 (QNM98_17380)	-	3519158..3520006 (-)	849	WP_015418336.1	DegV family protein	-
QNM98_RS17385 (QNM98_17385)	degU	3520104..3520793 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
QNM98_RS17390 (QNM98_17390)	degS	3520870..3522033 (-)	1164	WP_007407484.1	two-component sensor histidine kinase DegS	Regulator
QNM98_RS17395 (QNM98_17395)	-	3522256..3522903 (+)	648	WP_003151384.1	YigZ family protein	-
QNM98_RS17400 (QNM98_17400)	-	3522908..3524122 (+)	1215	WP_015418337.1	LCP family protein	-
QNM98_RS17405 (QNM98_17405)	-	3524212..3525288 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
QNM98_RS17410 (QNM98_17410)	-	3525421..3526617 (-)	1197	WP_015418338.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.78 Da
• Isoelectric Point: 6.8616

>NTDB_id=837211 QNM98_RS17390 WP_007407484.1 3520870..3522033(-) (degS) [Bacillus velezensis strain B31]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=837211 QNM98_RS17390 WP_007407484.1 3520870..3522033(-) (degS) [Bacillus velezensis strain B31]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TCTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTGCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A3KLC1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951