Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   QNM98_RS15370 Genome accession   NZ_CP126226
Coordinates   3092088..3093074 (-) Length   328 a.a.
NCBI ID   WP_269195024.1    Uniprot ID   -
Organism   Bacillus velezensis strain B31     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3087088..3098074
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNM98_RS15335 (QNM98_15335) - 3087344..3087820 (+) 477 WP_007613428.1 Na+/H+ antiporter subunit E -
  QNM98_RS15340 (QNM98_15340) - 3087820..3088104 (+) 285 WP_012118311.1 Na(+)/H(+) antiporter subunit F1 -
  QNM98_RS15345 (QNM98_15345) mnhG 3088088..3088462 (+) 375 WP_003152056.1 monovalent cation/H(+) antiporter subunit G -
  QNM98_RS15350 (QNM98_15350) - 3088502..3088885 (-) 384 WP_053574130.1 hotdog fold thioesterase -
  QNM98_RS15355 (QNM98_15355) comA 3088907..3089551 (-) 645 WP_003152052.1 response regulator transcription factor Regulator
  QNM98_RS15360 (QNM98_15360) comP 3089632..3091935 (-) 2304 WP_284064747.1 histidine kinase Regulator
  QNM98_RS15365 (QNM98_15365) comX 3091955..3092134 (-) 180 WP_306383677.1 competence pheromone ComX -
  QNM98_RS15370 (QNM98_15370) comQ 3092088..3093074 (-) 987 WP_269195024.1 class 1 isoprenoid biosynthesis enzyme Regulator
  QNM98_RS15375 (QNM98_15375) degQ 3093205..3093345 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  QNM98_RS15380 (QNM98_15380) - 3093811..3094152 (+) 342 WP_015418107.1 hypothetical protein -
  QNM98_RS15385 (QNM98_15385) - 3094159..3095382 (-) 1224 WP_015418108.1 EAL and HDOD domain-containing protein -
  QNM98_RS15390 (QNM98_15390) - 3095512..3096978 (-) 1467 WP_015418109.1 nicotinate phosphoribosyltransferase -
  QNM98_RS15395 (QNM98_15395) - 3096996..3097547 (-) 552 WP_003152033.1 isochorismatase family cysteine hydrolase -
  QNM98_RS15400 (QNM98_15400) - 3097644..3098042 (-) 399 WP_003152031.1 DUF1694 domain-containing protein -

Sequence


Protein


Download         Length: 328 a.a.        Molecular weight: 37726.29 Da        Isoelectric Point: 5.4671

>NTDB_id=837204 QNM98_RS15370 WP_269195024.1 3092088..3093074(-) (comQ) [Bacillus velezensis strain B31]
MKTIIEQICLDANQIKNRMKSIIERNIFNEHLMQLLLSFIEPKKNFSLAESAVLHYVIFDGENQETAVNLGAAIEILTLT
SDIIDDLEDEDNRDAPWMKIDRSLALSAAFSLYTAGLQSINSISTNPLVIKYVLKYIQDAMQGQHDDLINKPKTEDECLE
VIKLKCGSLFALANVTGTLLATGEFNKSVESYSYYKGIFEQISGDYHAIFKDNTSDILKDKHTLINLYLKRLFNKSSQEL
LCIFSDQKLYSQLRLNKKEFIQKLYDSGASQYVSVLYQLYMHKCETEVENLNLDIKKIKIIKKHLLNNKNNKKDDEDAEF
NKLFFELS

Nucleotide


Download         Length: 987 bp        

>NTDB_id=837204 QNM98_RS15370 WP_269195024.1 3092088..3093074(-) (comQ) [Bacillus velezensis strain B31]
GTGAAGACAATTATTGAGCAAATATGTTTAGATGCCAACCAAATCAAGAATAGAATGAAGAGTATAATAGAGCGGAACAT
ATTTAATGAACATCTAATGCAGCTCCTTCTCAGTTTTATTGAACCAAAAAAAAATTTTTCTCTAGCTGAATCAGCTGTTT
TGCATTATGTGATCTTTGACGGCGAAAATCAAGAAACCGCAGTGAACTTAGGTGCCGCTATTGAAATTCTTACACTTACT
TCCGATATAATTGATGATCTGGAAGATGAGGATAATCGAGATGCTCCTTGGATGAAGATAGATCGTTCACTAGCATTAAG
TGCAGCATTTTCATTATACACAGCAGGATTGCAAAGCATTAATTCGATTAGTACGAATCCTTTAGTGATTAAGTATGTAT
TAAAATATATTCAAGATGCAATGCAGGGTCAACATGATGATTTGATCAATAAACCAAAGACAGAAGATGAATGTTTAGAG
GTAATCAAGTTAAAATGCGGAAGTTTATTTGCGTTAGCAAATGTTACTGGTACGCTTTTAGCAACTGGAGAATTCAATAA
ATCTGTTGAAAGTTATTCCTATTATAAAGGGATATTTGAACAAATTTCCGGCGATTATCATGCTATTTTTAAGGATAATA
CTAGTGATATTCTGAAAGATAAACATACATTGATTAATTTATATCTTAAGCGCTTGTTTAATAAGTCTTCTCAAGAATTG
CTTTGTATATTCTCAGATCAAAAATTATATTCGCAACTGCGGCTTAATAAAAAAGAGTTTATCCAAAAGCTGTATGATTC
TGGAGCATCTCAATATGTTTCGGTTTTATACCAACTATACATGCATAAGTGTGAAACTGAAGTTGAAAATTTAAATTTAG
ATATAAAGAAGATAAAAATAATAAAAAAACACTTGTTGAATAATAAGAATAATAAGAAGGATGATGAAGATGCAGAATTT
AATAAATTATTTTTTGAATTATCCTGA

Domains


Predicted by InterproScan.

(59-232)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

61.938

88.11

0.546