Detailed information NTG0836784

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: OH686_RS21455
• Genome accession: NZ_CP126126
• Coordinates: 4491000..4493228 (+)
• Length: 742 a.a.
• NCBI ID: WP_289535101.1
• Uniprot ID: -
• Organism: Pseudomonas sp. SO81
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4486000..4498228

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OH686_RS21425 (OH686_22015)	-	4486194..4486490 (-)	297	WP_289535093.1	phosphodiesterase	-
OH686_RS21430 (OH686_22020)	-	4486490..4487062 (-)	573	WP_289535094.1	PilZ domain-containing protein	-
OH686_RS21435 (OH686_22025)	-	4487161..4488417 (+)	1257	WP_289535095.1	lipoprotein-releasing ABC transporter permease subunit	-
OH686_RS21440 (OH686_22030)	lolD	4488410..4489093 (+)	684	WP_289535097.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
OH686_RS21445 (OH686_22035)	-	4489095..4490339 (+)	1245	WP_289535099.1	lipoprotein-releasing ABC transporter permease subunit	-
OH686_RS21450 (OH686_22040)	-	4490376..4490903 (-)	528	WP_137971803.1	DUF2062 domain-containing protein	-
OH686_RS21455 (OH686_22045)	comA	4491000..4493228 (+)	2229	WP_289535101.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
OH686_RS21460 (OH686_22050)	exbB	4493302..4493973 (+)	672	WP_289535102.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
OH686_RS21465 (OH686_22055)	-	4493970..4494401 (+)	432	WP_289535104.1	biopolymer transporter ExbD	-
OH686_RS21470 (OH686_22060)	lpxK	4494398..4495402 (+)	1005	WP_289535105.1	tetraacyldisaccharide 4'-kinase	-
OH686_RS21475 (OH686_22065)	-	4495438..4495623 (+)	186	WP_137971807.1	Trm112 family protein	-
OH686_RS21480 (OH686_22070)	kdsB	4495624..4496385 (+)	762	WP_289535107.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
OH686_RS21485 (OH686_22075)	-	4496385..4496849 (+)	465	WP_289535109.1	low molecular weight protein-tyrosine-phosphatase	-
OH686_RS21490 (OH686_22080)	murB	4496846..4497865 (+)	1020	WP_289535110.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 742 a.a.
• Molecular weight: 80948.08 Da
• Isoelectric Point: 8.0853

>NTDB_id=836784 OH686_RS21455 WP_289535101.1 4491000..4493228(+) (comA) [Pseudomonas sp. SO81]
MRTGMLALAAGLACLPLLPELPPTWLLLLALLPLALMLLPWRSYAISFLLFGFVWACCSAQAALDDRLLPELDGRTLWLE
GRVSGLPEVSEGVVRFQLEEPMARAHRLPEHLRLSWYDGPKVLAGERWRLAVKLKRPRGLVNPQGFDYEAWLLAQRIGAT
GTIKQGERLSEATGPAAWRDQLRQRLLGVEAHGRAGGLAALVLGDDSGLSRADWRTLQDTGTVHLLVISGQHVALLAAVL
YGLVAGLARLGLWPRLLPWLPWACGLAFAGALGYGVLAGFEVPVRRACVMVALVLLWRLRFRHLGLWWPLALALILVLLV
EPLASLQAGFWLSFGAVAVLVWVFGGRLGTWSWWRVWWRAQWTLALGLLPLFFALGLPLSLSGPLANLVAVPWVSLLVVP
LALLGTLLLPVPWLGEGLLWLAGGLLELLFQLLAWIAALLPAWLPTALPLWCWLIGSLGVLLCLMPSGVPLRALGLAMLL
AFAVPPRERIPSGQAEIWQLDVGQGLAVLVRTREHALLYDAGPRFGDFDLGERVVLPSLRQLDVSHLDLMLLSHADSDHA
GGAEALARGLPIDRVLSGESAVLPASLAAQPCIDGASWSWDGVRFTTWRWAGAGEGNPASCLLKVEAAGERLLLTGDIDE
AAEAALLAAGRDLRAEWLQIPHHGSRSSSSAAFLDAVAPRAALLSRGWHNPFGHPHPTVLARYRERDITLYDSAERGAVR
LLLGSGEGVSSWRERPRFWREK

Nucleotide

• Length: 2229 bp

>NTDB_id=836784 OH686_RS21455 WP_289535101.1 4491000..4493228(+) (comA) [Pseudomonas sp. SO81]
ATGCGCACAGGGATGCTCGCGCTGGCTGCAGGCCTGGCCTGCCTTCCGTTACTGCCGGAGCTGCCGCCGACCTGGCTGCT
GCTGCTGGCGCTCTTGCCCTTGGCGCTGATGCTATTGCCTTGGCGCAGCTATGCCATCTCCTTCCTATTGTTCGGCTTTG
TCTGGGCCTGCTGCAGCGCCCAGGCGGCGCTGGATGATCGCCTGCTTCCCGAGCTGGACGGCCGCACCCTGTGGCTGGAG
GGGCGGGTGAGCGGCCTGCCGGAGGTGAGCGAGGGTGTGGTGCGCTTCCAACTGGAAGAGCCGATGGCGCGTGCGCACCG
ACTGCCCGAGCACCTGCGCCTGTCCTGGTATGACGGCCCGAAGGTGCTGGCCGGCGAACGCTGGCGCCTGGCGGTCAAGC
TCAAGCGCCCGCGCGGCCTGGTCAATCCGCAGGGCTTCGATTACGAGGCCTGGCTGCTGGCCCAGCGCATCGGCGCCACC
GGCACCATCAAGCAGGGCGAGCGGCTGAGCGAGGCCACGGGACCGGCGGCCTGGCGCGACCAGCTGCGTCAGCGCCTGCT
CGGCGTTGAGGCCCATGGTCGCGCCGGCGGGTTGGCGGCGTTGGTGCTCGGCGACGACTCCGGCCTCAGTCGCGCCGATT
GGCGCACGCTACAGGACACCGGCACCGTGCACCTGCTGGTGATCTCCGGCCAGCACGTGGCGCTGCTCGCCGCCGTGCTC
TATGGCCTGGTCGCCGGACTGGCTCGCCTCGGTCTGTGGCCGCGCCTGCTGCCCTGGCTGCCCTGGGCCTGTGGCCTGGC
CTTCGCCGGTGCGCTGGGCTATGGCGTGCTAGCCGGCTTCGAGGTGCCGGTACGGCGGGCCTGCGTGATGGTGGCGCTGG
TGCTGCTCTGGCGCCTGCGCTTCCGACACCTGGGGCTGTGGTGGCCGTTGGCGCTGGCGCTCATTCTGGTGTTGCTGGTC
GAGCCTCTGGCCAGCCTGCAGGCGGGCTTCTGGTTGTCCTTCGGCGCGGTGGCGGTGCTGGTCTGGGTGTTCGGTGGGCG
GCTCGGCACTTGGTCCTGGTGGCGCGTCTGGTGGCGGGCGCAGTGGACGCTGGCGCTGGGCTTATTGCCGCTGTTCTTCG
CCCTCGGCCTGCCCCTGAGCCTGAGCGGCCCGCTGGCCAACCTGGTCGCGGTGCCCTGGGTCAGTCTGCTGGTGGTGCCG
TTGGCGCTGCTCGGCACCCTGCTGTTGCCGGTGCCCTGGCTGGGGGAGGGGCTGCTGTGGCTGGCCGGCGGCCTGCTGGA
ACTCCTGTTCCAGCTGCTGGCCTGGATCGCGGCGCTGCTGCCGGCCTGGCTGCCTACCGCGCTGCCGCTCTGGTGCTGGC
TGATCGGCAGCCTGGGTGTGTTGTTGTGCCTGATGCCGTCTGGTGTGCCACTGCGGGCGTTGGGTTTGGCGATGCTGCTG
GCATTCGCTGTTCCGCCGCGGGAGCGGATCCCGTCGGGGCAGGCGGAAATCTGGCAGCTGGATGTCGGCCAGGGCCTGGC
CGTGCTGGTGCGCACCCGCGAGCACGCGTTGCTGTACGACGCCGGGCCGCGCTTCGGTGACTTCGACCTGGGCGAGCGGG
TAGTGCTGCCTTCGCTGCGCCAGCTCGATGTGTCCCACCTCGACCTGATGCTGCTCAGCCATGCCGATAGCGATCACGCC
GGCGGCGCCGAGGCACTGGCGCGTGGTCTGCCGATCGACCGTGTGCTGAGTGGCGAGTCGGCCGTGTTGCCGGCCAGCCT
GGCGGCGCAGCCCTGCATCGATGGGGCAAGCTGGAGCTGGGACGGCGTGCGCTTCACTACCTGGCGCTGGGCCGGGGCGG
GAGAGGGCAACCCGGCTTCTTGCCTGCTCAAGGTCGAGGCAGCAGGCGAACGGCTGCTGCTGACCGGCGATATAGATGAG
GCGGCGGAAGCGGCGCTGCTGGCGGCCGGTCGCGATCTGCGCGCCGAGTGGCTGCAGATACCGCACCATGGCAGTCGCAG
CTCGTCGTCGGCGGCGTTTCTCGATGCGGTGGCGCCACGGGCCGCCTTGCTCTCGCGAGGTTGGCACAACCCCTTCGGTC
ATCCGCACCCGACTGTGCTGGCGCGCTATCGCGAGCGCGACATCACCCTGTATGACAGCGCCGAACGCGGTGCCGTGCGC
CTGCTGCTGGGCTCGGGCGAGGGCGTTTCCAGCTGGCGCGAGCGTCCGCGTTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (21-168)

• Competence protein (Competence) (201-465)

• Metallo-beta-lactamase superfamily (Lactamase_B) (501-685)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	65.833	97.035	0.639
comA	Ralstonia pseudosolanacearum GMI1000	35.125	100	0.396