Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | QNH17_RS21770 | Genome accession | NZ_CP126107 |
| Coordinates | 4405809..4406891 (+) | Length | 360 a.a. |
| NCBI ID | WP_283875097.1 | Uniprot ID | - |
| Organism | Neobacillus sp. SuZ13 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 4400809..4411891
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QNH17_RS21755 (QNH17_21755) | gcvT | 4401659..4402765 (-) | 1107 | WP_283875094.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| QNH17_RS21760 (QNH17_21760) | - | 4403201..4404889 (+) | 1689 | WP_283875095.1 | SNF2-related protein | - |
| QNH17_RS21765 (QNH17_21765) | - | 4404867..4405658 (+) | 792 | WP_283875096.1 | YqhG family protein | - |
| QNH17_RS21770 (QNH17_21770) | comGA | 4405809..4406891 (+) | 1083 | WP_283875097.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| QNH17_RS21775 (QNH17_21775) | comGB | 4406878..4407909 (+) | 1032 | WP_283875098.1 | competence type IV pilus assembly protein ComGB | - |
| QNH17_RS21780 (QNH17_21780) | comGC | 4407933..4408244 (+) | 312 | WP_283879569.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| QNH17_RS21785 (QNH17_21785) | comGD | 4408251..4408685 (+) | 435 | WP_283875099.1 | competence type IV pilus minor pilin ComGD | - |
| QNH17_RS21790 (QNH17_21790) | - | 4408675..4409013 (+) | 339 | WP_283875100.1 | hypothetical protein | - |
| QNH17_RS21795 (QNH17_21795) | comGF | 4408961..4409437 (+) | 477 | WP_283875101.1 | competence type IV pilus minor pilin ComGF | - |
| QNH17_RS21800 (QNH17_21800) | comGG | 4409434..4409820 (+) | 387 | WP_283875102.1 | competence type IV pilus minor pilin ComGG | - |
| QNH17_RS21805 (QNH17_21805) | - | 4409870..4410055 (+) | 186 | WP_283875103.1 | YqzE family protein | - |
| QNH17_RS21810 (QNH17_21810) | - | 4410274..4410972 (+) | 699 | WP_283879570.1 | helix-turn-helix domain-containing protein | - |
| QNH17_RS21815 (QNH17_21815) | - | 4411056..4411298 (+) | 243 | WP_088088969.1 | DUF2626 domain-containing protein | - |
Sequence
Protein
Download Length: 360 a.a. Molecular weight: 40473.71 Da Isoelectric Point: 8.2500
>NTDB_id=836300 QNH17_RS21770 WP_283875097.1 4405809..4406891(+) (comGA) [Neobacillus sp. SuZ13]
MVPIVSAIEILANRIIADAARNQATDIHIIPRKNDTLIQIRLTNNLIPRLSLPKDECDRLISHFKFTANMDIGERRRPQS
GAFFCEVDGQLMGLRLSTLPSNNRESLVIRLLPQQEQIPFHQLSLFPSMTRKLLALLKHAHGLIIFTGPTGSGKTTTLYS
LLNETAHLFHRNVITLEDPIEKNYDSVLQIQVNEKAGVTYASGLKAILRHDPDIIMVGEIRDAETAKIAVRAALTGHLVL
STMHTRDAKGAVYRLREFGVNWLEVEQTLIAITAQRLVELSCPFCEGDCTPICYSYGRWKRASVFELLSGRNLHGVMKAA
QGDKINTRYRTLKDVINKGIALGYIQESEYDRLVYDDESS
MVPIVSAIEILANRIIADAARNQATDIHIIPRKNDTLIQIRLTNNLIPRLSLPKDECDRLISHFKFTANMDIGERRRPQS
GAFFCEVDGQLMGLRLSTLPSNNRESLVIRLLPQQEQIPFHQLSLFPSMTRKLLALLKHAHGLIIFTGPTGSGKTTTLYS
LLNETAHLFHRNVITLEDPIEKNYDSVLQIQVNEKAGVTYASGLKAILRHDPDIIMVGEIRDAETAKIAVRAALTGHLVL
STMHTRDAKGAVYRLREFGVNWLEVEQTLIAITAQRLVELSCPFCEGDCTPICYSYGRWKRASVFELLSGRNLHGVMKAA
QGDKINTRYRTLKDVINKGIALGYIQESEYDRLVYDDESS
Nucleotide
Download Length: 1083 bp
>NTDB_id=836300 QNH17_RS21770 WP_283875097.1 4405809..4406891(+) (comGA) [Neobacillus sp. SuZ13]
GTGGTACCTATTGTTAGCGCGATAGAAATCTTAGCAAATCGAATTATTGCAGATGCGGCACGAAACCAGGCAACAGACAT
TCACATTATCCCAAGGAAGAATGACACACTCATTCAAATACGTTTAACCAACAATCTCATTCCCCGACTATCCCTTCCAA
AAGATGAATGCGACAGATTAATCTCACATTTTAAATTCACAGCCAATATGGATATCGGCGAAAGAAGACGGCCTCAAAGC
GGAGCATTTTTTTGTGAGGTTGACGGACAATTAATGGGCTTAAGACTATCCACCCTTCCTTCGAATAACAGAGAGAGCCT
CGTCATCCGGCTGCTGCCTCAGCAAGAACAAATTCCTTTTCACCAACTATCACTATTCCCGTCAATGACACGAAAACTAC
TCGCCCTTCTCAAACATGCTCATGGACTAATCATTTTCACCGGGCCGACTGGCAGCGGCAAAACAACTACCCTTTATTCC
CTTTTAAATGAAACAGCCCACCTATTTCACCGAAATGTCATCACACTCGAAGATCCCATTGAAAAAAACTATGACTCCGT
CCTGCAAATACAAGTCAATGAAAAGGCAGGCGTAACATATGCATCTGGTCTAAAGGCTATTCTTCGTCATGACCCTGATA
TTATTATGGTTGGTGAAATCCGCGATGCTGAGACGGCGAAAATTGCGGTAAGAGCTGCCTTAACAGGCCATCTCGTCCTT
TCCACGATGCATACTCGGGATGCGAAGGGAGCGGTTTATCGCCTGCGAGAGTTTGGTGTGAATTGGTTAGAAGTTGAACA
GACGCTGATTGCCATAACAGCACAAAGATTAGTTGAACTCTCCTGCCCTTTTTGTGAAGGGGACTGCACTCCTATTTGCT
ATTCATATGGCAGATGGAAACGTGCAAGTGTGTTTGAACTATTATCAGGGAGAAATTTACACGGTGTAATGAAGGCCGCC
CAAGGCGATAAAATAAATACTCGTTACCGCACCTTAAAAGATGTAATAAACAAAGGGATTGCCCTTGGTTATATTCAAGA
ATCTGAATACGATCGATTGGTGTATGATGATGAATCGTCATAA
GTGGTACCTATTGTTAGCGCGATAGAAATCTTAGCAAATCGAATTATTGCAGATGCGGCACGAAACCAGGCAACAGACAT
TCACATTATCCCAAGGAAGAATGACACACTCATTCAAATACGTTTAACCAACAATCTCATTCCCCGACTATCCCTTCCAA
AAGATGAATGCGACAGATTAATCTCACATTTTAAATTCACAGCCAATATGGATATCGGCGAAAGAAGACGGCCTCAAAGC
GGAGCATTTTTTTGTGAGGTTGACGGACAATTAATGGGCTTAAGACTATCCACCCTTCCTTCGAATAACAGAGAGAGCCT
CGTCATCCGGCTGCTGCCTCAGCAAGAACAAATTCCTTTTCACCAACTATCACTATTCCCGTCAATGACACGAAAACTAC
TCGCCCTTCTCAAACATGCTCATGGACTAATCATTTTCACCGGGCCGACTGGCAGCGGCAAAACAACTACCCTTTATTCC
CTTTTAAATGAAACAGCCCACCTATTTCACCGAAATGTCATCACACTCGAAGATCCCATTGAAAAAAACTATGACTCCGT
CCTGCAAATACAAGTCAATGAAAAGGCAGGCGTAACATATGCATCTGGTCTAAAGGCTATTCTTCGTCATGACCCTGATA
TTATTATGGTTGGTGAAATCCGCGATGCTGAGACGGCGAAAATTGCGGTAAGAGCTGCCTTAACAGGCCATCTCGTCCTT
TCCACGATGCATACTCGGGATGCGAAGGGAGCGGTTTATCGCCTGCGAGAGTTTGGTGTGAATTGGTTAGAAGTTGAACA
GACGCTGATTGCCATAACAGCACAAAGATTAGTTGAACTCTCCTGCCCTTTTTGTGAAGGGGACTGCACTCCTATTTGCT
ATTCATATGGCAGATGGAAACGTGCAAGTGTGTTTGAACTATTATCAGGGAGAAATTTACACGGTGTAATGAAGGCCGCC
CAAGGCGATAAAATAAATACTCGTTACCGCACCTTAAAAGATGTAATAAACAAAGGGATTGCCCTTGGTTATATTCAAGA
ATCTGAATACGATCGATTGGTGTATGATGATGAATCGTCATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
56.056 |
98.611 |
0.553 |
| pilB | Glaesserella parasuis strain SC1401 |
40.057 |
97.778 |
0.392 |
| pilB | Haemophilus influenzae 86-028NP |
37.249 |
96.944 |
0.361 |