Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QNH19_RS02000 Genome accession   NZ_CP126104
Coordinates   393932..394885 (+) Length   317 a.a.
NCBI ID   WP_059366593.1    Uniprot ID   -
Organism   Bacillus velezensis strain MB7_B11     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 388932..399885
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH19_RS01975 (QNH19_01975) - 388978..390411 (+) 1434 WP_162492834.1 HAMP domain-containing sensor histidine kinase -
  QNH19_RS01980 (QNH19_01980) rapC 390564..391712 (+) 1149 WP_283887753.1 tetratricopeptide repeat protein Regulator
  QNH19_RS01985 (QNH19_01985) phrC 391696..391815 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  QNH19_RS01990 (QNH19_01990) - 391964..392059 (-) 96 WP_012116800.1 YjcZ family sporulation protein -
  QNH19_RS01995 (QNH19_01995) - 392154..393518 (-) 1365 WP_136396097.1 aspartate kinase -
  QNH19_RS02000 (QNH19_02000) ceuB 393932..394885 (+) 954 WP_059366593.1 ABC transporter permease Machinery gene
  QNH19_RS02005 (QNH19_02005) - 394875..395822 (+) 948 WP_007410274.1 iron chelate uptake ABC transporter family permease subunit -
  QNH19_RS02010 (QNH19_02010) - 395816..396574 (+) 759 WP_063096189.1 ABC transporter ATP-binding protein -
  QNH19_RS02015 (QNH19_02015) - 396596..397540 (+) 945 WP_063096191.1 siderophore ABC transporter substrate-binding protein -
  QNH19_RS02020 (QNH19_02020) - 397582..399006 (-) 1425 WP_063096193.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=836071 QNH19_RS02000 WP_059366593.1 393932..394885(+) (ceuB) [Bacillus velezensis strain MB7_B11]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLLIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=836071 QNH19_RS02000 WP_059366593.1 393932..394885(+) (ceuB) [Bacillus velezensis strain MB7_B11]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCGGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGATTGGGCAAGGCTCGGAATCTTGATTTCATTAATGCTTTTTACGTCAGCGAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATATGACCTGATC
CAAAACCTGTCGTCTTGGCTGCAGGGAGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTTTTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTTAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCGCTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

99.685

0.536