Detailed information NTG0835669

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QNH34_RS16960
• Genome accession: NZ_CP126096
• Coordinates: 3256536..3257711 (-)
• Length: 391 a.a.
• NCBI ID: WP_024719243.1
• Uniprot ID: A0A081LEM4
• Organism: Bacillus altitudinis strain G6S2
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3251536..3262711

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH34_RS16930 (QNH34_16930)	-	3251710..3252129 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
QNH34_RS16935 (QNH34_16935)	comFC	3252186..3252872 (-)	687	WP_176544677.1	ComF family protein	Machinery gene
QNH34_RS16940 (QNH34_16940)	-	3252869..3253162 (-)	294	WP_008348267.1	competence protein ComFB	-
QNH34_RS16945 (QNH34_16945)	comFA	3253227..3254354 (-)	1128	WP_045033977.1	DEAD/DEAH box helicase	Machinery gene
QNH34_RS16950 (QNH34_16950)	-	3254728..3255570 (-)	843	WP_024719242.1	DegV family protein	-
QNH34_RS16955 (QNH34_16955)	degU	3255782..3256471 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
QNH34_RS16960 (QNH34_16960)	degS	3256536..3257711 (-)	1176	WP_024719243.1	sensor histidine kinase	Regulator
QNH34_RS16965 (QNH34_16965)	-	3257933..3258601 (+)	669	WP_017357860.1	YigZ family protein	-
QNH34_RS16970 (QNH34_16970)	-	3258586..3259683 (+)	1098	WP_007499958.1	LCP family protein	-
QNH34_RS16975 (QNH34_16975)	-	3259722..3260789 (-)	1068	WP_024719245.1	MraY family glycosyltransferase	-
QNH34_RS16980 (QNH34_16980)	-	3260924..3262120 (-)	1197	WP_039169832.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45550.27 Da
• Isoelectric Point: 5.8757

>NTDB_id=835669 QNH34_RS16960 WP_024719243.1 3256536..3257711(-) (degS) [Bacillus altitudinis strain G6S2]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTENERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=835669 QNH34_RS16960 WP_024719243.1 3256536..3257711(-) (degS) [Bacillus altitudinis strain G6S2]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCCTGCAAGACGTCATTGAAC
GCTCTGAAACGCTTGTGAGCCAGATCACAGTGGTTCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATTGAACGAATTTTTAGAGACCGTG
GAACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAATGCCTAGGGGATACAGAAAATGAAAGAATTGCTTCTCAGTTCGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTGAAGCATTCCGAAGCTGAAGAAATCTCTGTAAAAGTAGAAGTG
ACAAAAGACTTTGTCACGTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAATAAAAACAA
ATCCTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

3D structure

• AlphaFold DB: A0A081LEM4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841