Detailed information NTG0835666

Bioinformatically predicted

Overview

• Name: comFC
• Type: Machinery gene
• Locus tag: QNH34_RS16935
• Genome accession: NZ_CP126096
• Coordinates: 3252186..3252872 (-)
• Length: 228 a.a.
• NCBI ID: WP_176544677.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain G6S2
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3247186..3257872

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNH34_RS16900 (QNH34_16900)	fliW	3247322..3247756 (-)	435	WP_025208061.1	flagellar assembly protein FliW	-
QNH34_RS16905 (QNH34_16905)	-	3247785..3248363 (-)	579	WP_024719238.1	DUF6470 family protein	-
QNH34_RS16910 (QNH34_16910)	flgL	3248410..3249321 (-)	912	WP_008348257.1	flagellar hook-associated protein FlgL	-
QNH34_RS16915 (QNH34_16915)	flgK	3249330..3250850 (-)	1521	WP_024719239.1	flagellar hook-associated protein FlgK	-
QNH34_RS16920 (QNH34_16920)	-	3250866..3251348 (-)	483	WP_039169793.1	flagellar protein FlgN	-
QNH34_RS16925 (QNH34_16925)	flgM	3251367..3251630 (-)	264	WP_003213252.1	flagellar biosynthesis anti-sigma factor FlgM	-
QNH34_RS16930 (QNH34_16930)	-	3251710..3252129 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
QNH34_RS16935 (QNH34_16935)	comFC	3252186..3252872 (-)	687	WP_176544677.1	ComF family protein	Machinery gene
QNH34_RS16940 (QNH34_16940)	-	3252869..3253162 (-)	294	WP_008348267.1	competence protein ComFB	-
QNH34_RS16945 (QNH34_16945)	comFA	3253227..3254354 (-)	1128	WP_045033977.1	DEAD/DEAH box helicase	Machinery gene
QNH34_RS16950 (QNH34_16950)	-	3254728..3255570 (-)	843	WP_024719242.1	DegV family protein	-
QNH34_RS16955 (QNH34_16955)	degU	3255782..3256471 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
QNH34_RS16960 (QNH34_16960)	degS	3256536..3257711 (-)	1176	WP_024719243.1	sensor histidine kinase	Regulator

Sequence

Protein

• Length: 228 a.a.
• Molecular weight: 26143.69 Da
• Isoelectric Point: 10.3239

>NTDB_id=835666 QNH34_RS16935 WP_176544677.1 3252186..3252872(-) (comFC) [Bacillus altitudinis strain G6S2]
MICPICESHFVAAFTWKSFLLLNEDRLCVACKNHLMKIQGPTCPKCGRAQSNDQLCQDCSRWNKRRDFAEILVMNRSVYA
YNDFMKDILARFKFRGDTALADLFKKDVRSAFKRSFSIKEPVLVPIPLSKERLKERGFNQSMMLASMIGGPILEPLIKVH
QSKQSKKRKNERLHQQNLFQLRQSNPIVLKDIILIDDIYTTGATVYHAAKILKDAGAKSVSSFTLIRS

Nucleotide

• Length: 687 bp

>NTDB_id=835666 QNH34_RS16935 WP_176544677.1 3252186..3252872(-) (comFC) [Bacillus altitudinis strain G6S2]
TTGATTTGTCCAATTTGTGAGAGCCATTTTGTGGCTGCTTTTACATGGAAATCATTCCTACTATTAAATGAAGATCGTTT
ATGTGTAGCATGTAAGAACCACTTGATGAAGATTCAAGGTCCTACTTGTCCCAAATGCGGAAGAGCGCAATCAAATGATC
AATTGTGTCAGGATTGTTCAAGGTGGAATAAACGACGGGATTTTGCTGAGATTCTTGTAATGAATCGGTCTGTTTATGCT
TACAACGACTTTATGAAAGATATTCTAGCTCGATTTAAATTTCGAGGTGATACGGCTTTAGCTGATCTATTTAAAAAAGA
TGTACGGTCAGCGTTTAAACGTTCTTTTTCAATCAAAGAACCGGTCCTTGTCCCAATTCCTTTGAGTAAAGAGAGATTAA
AGGAAAGAGGATTCAATCAGTCAATGATGCTTGCTTCCATGATTGGCGGACCTATATTGGAGCCACTTATAAAAGTACAT
CAAAGTAAGCAGTCTAAGAAAAGAAAAAATGAACGTTTACATCAACAGAATTTGTTCCAATTAAGGCAGTCAAACCCGAT
CGTTCTAAAGGATATCATATTAATCGATGATATTTATACAACTGGGGCGACAGTCTATCATGCAGCAAAAATTTTAAAAG
ACGCAGGCGCCAAAAGTGTTTCCTCTTTTACGTTGATTCGTAGTTAA

Domains

Predicted by InterproScan.

• Double zinc ribbon domain (DZR_2) (3-59)

• Phosphoribosyl transferase domain (Pribosyltran) (161-226)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFC	Bacillus subtilis subsp. subtilis str. 168	49.565	100	0.5
comFC/cflB	Streptococcus mitis SK321	38.428	100	0.386
comFC/cflB	Streptococcus mitis NCTC 12261	37.991	100	0.382
comFC/cflB	Streptococcus pneumoniae R6	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae TIGR4	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae Rx1	37.118	100	0.373
comFC/cflB	Streptococcus pneumoniae D39	37.118	100	0.373