Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   QNH40_RS15300 Genome accession   NZ_CP126086
Coordinates   2921736..2921876 (-) Length   46 a.a.
NCBI ID   WP_003213123.1    Uniprot ID   A0A5K1N966
Organism   Bacillus altitudinis strain CES-OCA-19     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2916736..2926876
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH40_RS15275 (QNH40_15275) - 2917058..2917447 (-) 390 WP_283931094.1 hotdog fold thioesterase -
  QNH40_RS15280 (QNH40_15280) comA 2917471..2918112 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  QNH40_RS15285 (QNH40_15285) comP 2918193..2920499 (-) 2307 WP_017358942.1 ATP-binding protein Regulator
  QNH40_RS15290 (QNH40_15290) comX 2920513..2920683 (-) 171 WP_017358941.1 competence pheromone ComX -
  QNH40_RS15295 (QNH40_15295) - 2920661..2921584 (-) 924 WP_035389264.1 polyprenyl synthetase family protein -
  QNH40_RS15300 (QNH40_15300) degQ 2921736..2921876 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  QNH40_RS15305 (QNH40_15305) - 2922382..2922735 (+) 354 WP_017358939.1 hypothetical protein -
  QNH40_RS15310 (QNH40_15310) - 2922772..2923998 (-) 1227 WP_046526550.1 HDOD domain-containing protein -
  QNH40_RS15315 (QNH40_15315) - 2924139..2925608 (-) 1470 WP_007500472.1 nicotinate phosphoribosyltransferase -
  QNH40_RS15320 (QNH40_15320) - 2925626..2926177 (-) 552 WP_046526549.1 isochorismatase family cysteine hydrolase -
  QNH40_RS15325 (QNH40_15325) - 2926238..2926645 (-) 408 WP_041091828.1 YueI family protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5677.42 Da        Isoelectric Point: 4.6828

>NTDB_id=835083 QNH40_RS15300 WP_003213123.1 2921736..2921876(-) (degQ) [Bacillus altitudinis strain CES-OCA-19]
MEKYEIEELKQLLWKLENEIRETTASLHNINKSIDQYDKYEYVKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=835083 QNH40_RS15300 WP_003213123.1 2921736..2921876(-) (degQ) [Bacillus altitudinis strain CES-OCA-19]
ATGGAAAAGTATGAAATCGAAGAACTTAAACAATTATTATGGAAACTTGAAAACGAAATTAGAGAAACAACGGCTTCTCT
TCATAACATTAACAAAAGCATTGATCAATACGACAAATATGAATATGTGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1N966

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

68.085

100

0.696