Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   QNH40_RS15285 Genome accession   NZ_CP126086
Coordinates   2918193..2920499 (-) Length   768 a.a.
NCBI ID   WP_017358942.1    Uniprot ID   -
Organism   Bacillus altitudinis strain CES-OCA-19     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2913193..2925499
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH40_RS15245 (QNH40_15245) - 2913599..2914030 (+) 432 WP_008345843.1 Na(+)/H(+) antiporter subunit B -
  QNH40_RS15250 (QNH40_15250) - 2914030..2914371 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  QNH40_RS15255 (QNH40_15255) - 2914364..2915842 (+) 1479 WP_148779657.1 Na+/H+ antiporter subunit D -
  QNH40_RS15260 (QNH40_15260) - 2915849..2916328 (+) 480 WP_008345848.1 Na+/H+ antiporter subunit E -
  QNH40_RS15265 (QNH40_15265) - 2916328..2916609 (+) 282 WP_008345849.1 Na(+)/H(+) antiporter subunit F1 -
  QNH40_RS15270 (QNH40_15270) mnhG 2916593..2916967 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  QNH40_RS15275 (QNH40_15275) - 2917058..2917447 (-) 390 WP_283931094.1 hotdog fold thioesterase -
  QNH40_RS15280 (QNH40_15280) comA 2917471..2918112 (-) 642 WP_007500477.1 response regulator transcription factor Regulator
  QNH40_RS15285 (QNH40_15285) comP 2918193..2920499 (-) 2307 WP_017358942.1 ATP-binding protein Regulator
  QNH40_RS15290 (QNH40_15290) comX 2920513..2920683 (-) 171 WP_017358941.1 competence pheromone ComX -
  QNH40_RS15295 (QNH40_15295) - 2920661..2921584 (-) 924 WP_035389264.1 polyprenyl synthetase family protein -
  QNH40_RS15300 (QNH40_15300) degQ 2921736..2921876 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  QNH40_RS15305 (QNH40_15305) - 2922382..2922735 (+) 354 WP_017358939.1 hypothetical protein -
  QNH40_RS15310 (QNH40_15310) - 2922772..2923998 (-) 1227 WP_046526550.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 768 a.a.        Molecular weight: 88578.24 Da        Isoelectric Point: 8.2943

>NTDB_id=835082 QNH40_RS15285 WP_017358942.1 2918193..2920499(-) (comP) [Bacillus altitudinis strain CES-OCA-19]
MRKFYSKLTVILVILSFIYVIYISYINVFNIFVGAAVKENSHGQLEVVDVDNFTDSYLAGVRKGDIILEVNGNKKPVEEV
KRGFLANVKSLVVDRHGDKIDLENVRLLSQANLFIYLIPVILYSICLFCIFMILKMNKANQKESAYILALFLLAVSIGYV
SSGGSGKGEAISRILVIVTMNIVPPLYMHFMYQYLKELGTEIIRRRVLFYLYLVPVTNVLLVLFYKNKAGPVDLLAYVNL
LSFFVLAFLSIIITIRAAKKLKDNEVSNVLRAFALILISAFSPFMLFFIIPYFFGIYFISPYVVASFVLLIPFFLVYQFM
SNKLYNVDFFMGRIKYYGFLAITPTILVVVLFDFIQKPNANFYTVKFTIITYILMLTVFYFKEIIDFRFRLKRFSEKHNY
QDSIFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKADGQIVEIDESIEESQLWKDYVDQFQDILGEVGKIIG
LDKGFMMKIGERGGHSFVICCLSNLRTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKKVMF
AMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNEQMSKVIQTTRETCHELRPQLLYDLGL
VKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKASQVLVMLICIKDQVVLHYEDDGV
GFDASQLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=835082 QNH40_RS15285 WP_017358942.1 2918193..2920499(-) (comP) [Bacillus altitudinis strain CES-OCA-19]
ATGAGAAAGTTTTACTCTAAGTTAACAGTTATATTAGTTATCCTTAGCTTCATCTATGTGATTTACATCTCTTATATCAA
CGTATTTAATATTTTTGTTGGAGCAGCTGTTAAGGAAAATAGTCACGGTCAACTTGAGGTAGTGGATGTCGATAATTTTA
CAGATAGCTATCTAGCTGGAGTTAGGAAAGGCGATATCATACTTGAAGTGAATGGGAATAAAAAACCAGTTGAAGAAGTT
AAAAGAGGTTTTTTAGCTAATGTTAAAAGTTTAGTCGTTGATAGACATGGTGATAAAATTGATTTAGAGAATGTAAGGTT
ATTGAGTCAAGCGAATCTGTTTATTTATCTAATACCAGTCATTCTTTATTCCATCTGTCTATTTTGTATATTTATGATTT
TAAAAATGAATAAAGCAAACCAAAAAGAGTCAGCTTATATTTTAGCTTTATTTCTTTTGGCGGTGTCTATAGGTTATGTA
AGTTCTGGTGGTTCTGGAAAAGGAGAGGCTATCAGTCGTATTCTTGTAATCGTTACAATGAATATTGTACCTCCACTATA
TATGCACTTTATGTATCAATATTTAAAAGAATTAGGAACAGAAATTATTCGTCGTCGAGTTCTTTTTTATTTGTATCTAG
TTCCAGTGACTAACGTTTTATTAGTTTTATTCTATAAAAATAAAGCAGGACCAGTAGATCTATTAGCATATGTCAATTTA
CTTTCATTTTTTGTTCTGGCTTTCCTTTCGATTATTATCACTATAAGGGCTGCTAAAAAATTGAAAGACAATGAAGTCAG
CAATGTACTTCGAGCATTTGCACTCATTTTAATCTCAGCATTCAGTCCATTCATGCTATTTTTTATCATTCCTTATTTTT
TTGGTATATATTTTATTTCACCGTATGTTGTTGCATCGTTTGTTCTTTTAATTCCTTTTTTCTTAGTCTATCAATTTATG
TCAAATAAGCTATATAATGTTGATTTCTTTATGGGAAGGATTAAATACTACGGTTTTTTAGCAATTACACCGACAATACT
AGTGGTTGTTCTTTTTGATTTTATTCAAAAGCCAAATGCAAATTTCTATACAGTGAAATTTACGATTATCACGTACATTC
TTATGCTTACCGTCTTCTACTTTAAAGAAATTATCGATTTCCGTTTTCGATTGAAGCGTTTTTCAGAGAAGCATAATTAT
CAGGATAGTATATTTAAATTCACACAGCTTATTCGTGAGGCGTCATCACTTCATCAAGTATTGTATCATTTAAAATACAC
CATCTTAGAAGTACTTGTTGTGAACAAAGCCTTTGTGCTTGAAGTGAAGGCAGATGGACAAATTGTTGAAATTGATGAAT
CAATAGAAGAAAGCCAGCTATGGAAAGATTATGTGGACCAATTTCAAGATATTTTAGGTGAAGTTGGTAAAATCATCGGG
CTTGATAAAGGGTTTATGATGAAAATTGGTGAGCGGGGCGGTCACTCGTTTGTGATTTGCTGTTTATCTAATTTAAGGAC
ACCTAAGCTGACCCGCGATGAAATTTCATGGCTGAAAACATTGGCATTTTACACAAGTGTCAGTTTAGAAAATGTCGTCA
AGATTGAAGAATTGATGGAGCATCTTGAGGATTTGAAACAGCGGGAAGCCAATCCCGCCTGGCTGAAGAAAGTCATGTTC
GCCATGGAAGAAAAGCAGCGCTCAGATTTAGCGAGGGATCTTCATGATTCTGTGCTGCAGGATTTGATTTCACTGAAGAG
ACAGTCCGAGATGTTCTTAACCAATTTCCAAAACAACCAATGCCCAACATCTATTGAAAATTCGCTGATCTCTTGGAATG
AACAAATGTCTAAGGTGATTCAAACCACGAGAGAAACATGTCATGAACTTCGGCCGCAGCTCCTCTATGACTTGGGGTTA
GTGAAGGCAATTTCGAAGCTGACTTCGCAAATTCAAGAGGAAGCGCCATTTCATATTAGGCTGAATACAACCCGCTTTGA
TAAAGAACTGGACATTGATATTGACTCACAGCTGAATATTTACCGGATAGTGCAGGAGCTGTTATCCAATGCGTTGAAGC
ATTCTAAGGCCAGCCAAGTCTTAGTGATGCTCATTTGTATTAAAGATCAAGTTGTTCTCCATTATGAGGACGATGGAGTC
GGATTTGATGCAAGCCAGCTTGATCAGCACACGATGAGCATGGGTCTTTCTGGCATAAGGGAACGAGTCAAAGCTCTAAA
TGGAAAGCTTCAAATTCACACAGCACCTGAAAAAGGGCTCAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.292

100

0.499