Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   QNH30_RS16070 Genome accession   NZ_CP126082
Coordinates   3096157..3098457 (-) Length   766 a.a.
NCBI ID   WP_041850586.1    Uniprot ID   -
Organism   Bacillus subtilis strain C1_13     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3091157..3103457
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH30_RS16030 (QNH30_16030) mrpB 3091624..3092055 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  QNH30_RS16035 (QNH30_16035) mrpC 3092055..3092396 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  QNH30_RS16040 (QNH30_16040) mrpD 3092389..3093870 (+) 1482 WP_041850587.1 Na+/H+ antiporter subunit D -
  QNH30_RS16045 (QNH30_16045) mrpE 3093876..3094352 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  QNH30_RS16050 (QNH30_16050) mrpF 3094352..3094636 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  QNH30_RS16055 (QNH30_16055) mnhG 3094620..3094994 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  QNH30_RS16060 (QNH30_16060) yuxO 3095033..3095413 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  QNH30_RS16065 (QNH30_16065) comA 3095432..3096076 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  QNH30_RS16070 (QNH30_16070) comP 3096157..3098457 (-) 2301 WP_041850586.1 histidine kinase Regulator
  QNH30_RS16075 (QNH30_16075) comX 3098469..3098633 (-) 165 WP_015384519.1 competence pheromone ComX -
  QNH30_RS16080 (QNH30_16080) - 3098646..3099506 (-) 861 WP_041850585.1 polyprenyl synthetase family protein -
  QNH30_RS16085 (QNH30_16085) degQ 3099690..3099830 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  QNH30_RS16090 (QNH30_16090) - 3100052..3100114 (+) 63 Protein_3100 hypothetical protein -
  QNH30_RS16095 (QNH30_16095) - 3100293..3100661 (+) 369 WP_041850584.1 hypothetical protein -
  QNH30_RS16100 (QNH30_16100) pdeH 3100637..3101866 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88486.61 Da        Isoelectric Point: 7.8711

>NTDB_id=834854 QNH30_RS16070 WP_041850586.1 3096157..3098457(-) (comP) [Bacillus subtilis strain C1_13]
MKAWYNKVSIFLILVSLVYVTYLTYISSSKLLVGAAVAENQDNEVVITNIEEFSTAYYSGIQKGDVIKSINNHKVKRPLE
VQKYNSNHVSSIVVERDGEKVKIKPDLMNDGNFTTFVIPLIFYIACLFCCFFILKINESKKLLSALILIIFLLSASLAYL
SAGGSAKGDWLSRCIMVFTLTSVMFNYLLFLYQYFKELGTVLFNKKVFILYAIPVLNLVFELLRTQLFFRHYVPKINLLS
FFISFIIVSVYFGSILIKSKDTEQAHIIKVLTIINILSFSPFLFLYIIPYVFLSTDGISSFVAASFMFLIPFSLVYQFMT
NKIYNVDFILSRLKYYGILALTPTIILVTVFELIGNPAGDFYYFRLAILMYIIMVAVFYYKEVLDFRFRLKRVSEKFNYQ
DSIYKFTQLIRDSTSLTQVFEELKTTILEVSLVSRAHIYEVSVDGSIKLYEELNQNSFEKVYEKEFRKVTSEIGKIVEFN
KGFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTI
EEKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKGDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGL
VKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGF
DQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=834854 QNH30_RS16070 WP_041850586.1 3096157..3098457(-) (comP) [Bacillus subtilis strain C1_13]
ATGAAGGCATGGTACAACAAAGTTTCAATTTTTTTGATTTTAGTTAGTTTAGTCTATGTAACTTATTTAACGTATATAAG
TTCGAGTAAACTTTTAGTTGGTGCAGCAGTAGCTGAAAATCAAGACAATGAAGTTGTAATAACAAATATTGAGGAATTTT
CTACGGCTTATTACTCAGGCATACAAAAAGGGGACGTCATCAAAAGTATCAATAATCATAAAGTTAAGCGTCCTCTTGAA
GTTCAAAAATATAATTCAAACCATGTGAGTTCTATAGTCGTCGAGAGAGATGGAGAAAAGGTTAAAATTAAGCCTGATTT
AATGAATGATGGGAATTTTACTACTTTTGTGATCCCATTAATATTTTATATAGCCTGTCTATTTTGTTGTTTCTTCATTC
TAAAAATAAATGAATCGAAAAAACTACTCTCTGCTTTGATTTTAATCATTTTCTTGTTATCTGCTTCTTTAGCATACTTA
AGTGCGGGTGGATCTGCAAAGGGAGATTGGTTAAGCAGATGTATAATGGTATTCACTTTAACTTCTGTAATGTTTAATTA
TCTTCTTTTCTTGTATCAGTATTTTAAAGAACTAGGCACTGTGTTATTCAACAAAAAAGTTTTTATATTATATGCAATTC
CAGTACTAAATCTAGTTTTTGAATTGTTGCGAACTCAACTTTTCTTTAGACATTATGTGCCTAAAATAAATTTACTTTCG
TTCTTTATTTCATTTATAATCGTGAGCGTATATTTTGGATCTATTTTAATTAAAAGTAAGGATACTGAACAAGCACATAT
TATAAAAGTTCTTACCATAATTAATATCTTATCTTTTTCGCCGTTTTTGTTTTTATATATAATACCTTATGTATTCTTAA
GCACTGATGGGATTTCTTCTTTTGTAGCTGCTTCATTTATGTTCCTAATACCATTTTCTTTGGTTTATCAATTTATGACA
AATAAAATTTATAATGTGGATTTTATTTTAAGTAGGTTAAAATATTATGGAATATTAGCATTAACGCCCACAATTATTTT
AGTTACGGTATTCGAGTTAATAGGAAATCCAGCTGGAGATTTCTATTATTTCAGACTGGCGATTCTTATGTATATTATTA
TGGTGGCGGTCTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAAAGGGTTTCGGAAAAATTCAATTATCAA
GACAGTATATATAAATTTACGCAGTTGATTAGAGATTCAACTTCTTTGACCCAAGTATTTGAGGAACTGAAAACCACGAT
ACTTGAGGTTTCGCTTGTAAGCCGAGCCCATATTTATGAGGTTTCAGTTGATGGAAGTATTAAACTCTATGAAGAACTTA
ATCAAAATTCATTTGAAAAAGTCTATGAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGGAAAATCGTTGAATTTAAT
AAAGGTTTTGTCATGAAGATTGGTGAACGCGGTGGTAAATCATTTGTGATCCTTTGTTTATCTAAAATGAATACGCCTCG
TCTCACACTCGAAGAACTTTCTTGGCTGAAAACTTTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATCG
AAGAACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTACACGATC
GAGGAAAAACAACGCTCCGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAAACGCCAGTG
TGAGCTGTTTTTGGGTGATTTTAAGAAGGGTGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTACAGATGAATG
AGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGATCTTGGATTG
GTGAAGGCGTTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGGCAGATTTAC
GGCTTCCCTTGATCTGGATTCGCAGCTGAATTTATACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTTAAGCACTCTC
AGGCGACGGATGTGCTGATTATGCTCATTAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGCGTTGGGTTT
GATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCG
CCTACGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

57.526

100

0.589