Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   QNH35_RS15840 Genome accession   NZ_CP126081
Coordinates   3031503..3033812 (-) Length   769 a.a.
NCBI ID   WP_217012172.1    Uniprot ID   -
Organism   Bacillus pumilus strain B2_10     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3026503..3038812
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNH35_RS15800 (QNH35_15800) - 3026892..3027323 (+) 432 WP_034620105.1 Na(+)/H(+) antiporter subunit B -
  QNH35_RS15805 (QNH35_15805) - 3027323..3027664 (+) 342 WP_003213576.1 Na(+)/H(+) antiporter subunit C -
  QNH35_RS15810 (QNH35_15810) - 3027657..3029135 (+) 1479 WP_265208432.1 Na+/H+ antiporter subunit D -
  QNH35_RS15815 (QNH35_15815) - 3029142..3029621 (+) 480 WP_003213059.1 Na+/H+ antiporter subunit E -
  QNH35_RS15820 (QNH35_15820) - 3029621..3029902 (+) 282 WP_003213177.1 Na(+)/H(+) antiporter subunit F1 -
  QNH35_RS15825 (QNH35_15825) mnhG 3029886..3030260 (+) 375 WP_003213369.1 monovalent cation/H(+) antiporter subunit G -
  QNH35_RS15830 (QNH35_15830) - 3030368..3030757 (-) 390 WP_265208433.1 hotdog fold thioesterase -
  QNH35_RS15835 (QNH35_15835) comA 3030781..3031422 (-) 642 WP_058013793.1 response regulator transcription factor Regulator
  QNH35_RS15840 (QNH35_15840) comP 3031503..3033812 (-) 2310 WP_217012172.1 ATP-binding protein Regulator
  QNH35_RS15845 (QNH35_15845) comX 3033870..3034037 (-) 168 WP_081311380.1 competence pheromone ComX -
  QNH35_RS15850 (QNH35_15850) - 3034034..3034948 (-) 915 WP_265208437.1 polyprenyl synthetase family protein -
  QNH35_RS15855 (QNH35_15855) degQ 3035100..3035240 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  QNH35_RS15860 (QNH35_15860) - 3035746..3036099 (+) 354 WP_113768032.1 inner spore coat protein -
  QNH35_RS15865 (QNH35_15865) - 3036130..3037356 (-) 1227 WP_106066310.1 HDOD domain-containing protein -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 89210.72 Da        Isoelectric Point: 8.3310

>NTDB_id=834776 QNH35_RS15840 WP_217012172.1 3031503..3033812(-) (comP) [Bacillus pumilus strain B2_10]
MKKLTYTKLSTFLVFLSFLFVIYISYIYVFDIFNGARVEKNTNGQTEVVDVEYLSLAYSSGLKEGDIILKINGQSNLIQD
HMINGKLRNVQRIDIQRGNQIISLKNKTLIGRESLFVYLIPLLLYSICLFCIFFIIKINKEPQRKSAFLLILFLLSICVG
YLSAGTSGIGDRFSHYVLLLCLSSVSILYIHFIYQYFKEFDVHLTNPKLIRYLYLIPIFNLAVHSGVSVSSELRKYVPSI
SLLFFFGTVLIALYLIVRGMKKYKKTAHGSVLKFFAIMNVLSFSPFILFFVIPYVFFDRYLIDPFILTSIVLLIPFSLVY
QFMTNKLYNMDFLISRLRYYGFLAITPTIFVVVTFYILQKPEDLKYTLKLALITYALMLAVFYFKEILDFRFRLKRFSEK
HNYQDSVFKFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKPDGQIEEIDESSGDSNLWKEYVDQFQDILGEVGK
IIELDKGFMMKIGERGGHSFVICCLSNLQTPKLTRDEISWLKTLAFYTSVSLENVVKIEELMEHLEDLKQREANPAWLKK
VMFAMEEKQRSDLARDLHDSVLQDLISLKRQSEMFLTNFHNDQCPTSIEQSLISWNEQMSKVIQTTRETCHELRPQLLYD
LGLVKAISKLTSQIQEEAPFHIRLNTTRFDKELDIDSQLNIYRIVQELLSNALKHSQATQVLVMLICIKDQVVLHYEDDG
VGFDASHLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=834776 QNH35_RS15840 WP_217012172.1 3031503..3033812(-) (comP) [Bacillus pumilus strain B2_10]
ATGAAAAAGCTTACCTATACAAAATTGTCCACGTTTCTTGTATTTTTATCTTTTTTATTTGTGATCTATATTTCATATAT
CTATGTATTTGATATTTTTAATGGTGCACGTGTAGAAAAAAATACAAACGGTCAAACGGAAGTTGTTGACGTTGAATATC
TTTCTTTAGCTTATTCGTCGGGGTTAAAAGAAGGAGATATTATACTAAAGATAAACGGACAATCTAATTTAATTCAAGAC
CACATGATCAATGGTAAGCTTAGAAATGTACAAAGAATTGATATACAAAGAGGCAACCAAATTATATCACTTAAAAATAA
GACATTGATTGGTCGCGAAAGCTTATTTGTCTATTTAATCCCTCTTCTTCTATATTCAATATGCTTATTCTGTATCTTTT
TTATTATTAAAATTAACAAAGAACCGCAACGAAAATCTGCATTTTTATTAATTTTATTCTTATTGTCAATTTGTGTTGGA
TATCTAAGTGCAGGTACGTCAGGAATTGGTGATAGATTTAGCCATTATGTTCTCTTATTATGTTTATCAAGTGTGTCTAT
CTTATATATTCATTTTATCTATCAATATTTCAAGGAATTTGATGTGCATTTAACGAATCCAAAGCTCATCAGGTACTTAT
ATTTGATCCCTATTTTTAACCTTGCCGTACACAGCGGGGTTTCGGTGTCATCTGAATTGAGAAAATATGTTCCTAGCATC
AGTTTGCTGTTTTTTTTCGGAACAGTTTTAATAGCCCTTTATTTAATAGTCAGAGGAATGAAGAAATATAAAAAAACAGC
ACATGGTTCTGTTTTAAAGTTTTTTGCTATTATGAATGTTTTGTCGTTCAGTCCATTCATTCTCTTTTTTGTTATTCCAT
ATGTGTTTTTTGATAGATATTTGATTGATCCTTTTATTTTGACATCAATCGTTTTGTTAATTCCTTTTTCTCTTGTATAC
CAATTCATGACGAACAAACTTTACAATATGGATTTTTTGATTAGTAGACTGAGGTATTATGGCTTTCTAGCCATCACACC
GACCATTTTTGTTGTCGTCACGTTTTACATTCTGCAAAAACCAGAAGATTTGAAGTACACCTTGAAGCTCGCATTAATCA
CTTATGCGCTCATGCTTGCTGTCTTTTATTTTAAAGAAATTCTAGATTTCCGCTTCCGGCTGAAACGTTTTTCAGAGAAG
CATAATTATCAGGACAGTGTGTTTAAATTTACTCAGCTCATTCGTGAGGCGTCATCACTTCACCAAGTGTTATATCACTT
GAAATACACCATTTTAGAAGTGCTGGTTGTGAATAAAGCCTTTGTGCTTGAAGTGAAGCCAGATGGGCAGATTGAAGAGA
TTGATGAATCTTCAGGTGATAGCAATCTATGGAAAGAGTATGTGGATCAATTTCAAGATATTTTAGGGGAAGTCGGGAAA
ATCATTGAGCTTGATAAAGGGTTCATGATGAAAATTGGCGAGCGGGGCGGTCACTCCTTTGTGATTTGCTGTTTATCCAA
TTTACAGACACCAAAATTGACACGTGATGAGATTTCTTGGTTGAAAACATTGGCGTTTTACACAAGTGTCAGTTTAGAAA
ATGTCGTCAAGATTGAAGAATTGATGGAGCATCTTGAAGATTTGAAGCAGCGTGAAGCGAACCCTGCTTGGCTGAAAAAA
GTCATGTTTGCGATGGAAGAAAAGCAGCGATCAGATTTAGCAAGAGATCTTCATGATTCTGTGCTGCAGGATTTGATATC
ACTGAAAAGGCAGTCAGAGATGTTTTTAACGAATTTCCATAATGACCAATGCCCGACTTCTATTGAACAATCGCTTATCT
CATGGAATGAGCAAATGTCTAAAGTGATTCAAACCACTAGAGAAACATGTCATGAACTTCGGCCGCAGCTACTGTATGAT
TTAGGTCTAGTGAAGGCGATATCGAAGCTGACTTCTCAAATCCAGGAGGAAGCACCGTTTCATATCCGGCTGAATACGAC
ACGTTTTGATAAAGAGCTGGACATTGATTCCCAGCTGAATATTTACCGGATTGTTCAAGAACTGTTATCCAATGCATTGA
AACACTCTCAAGCGACCCAAGTGCTGGTGATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTACGAGGATGATGGA
GTAGGCTTTGACGCAAGCCATCTTGATCAGCACACCATGAGCATGGGCCTCTCTGGGATCAGAGAACGAGTCAAAGCGTT
AAATGGGAAACTTCAAATTCACACTGCCCCTGAAAAAGGGCTCAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.354

100

0.497