Detailed information    

insolico Bioinformatically predicted

Overview

Name   recG   Type   Machinery gene
Locus tag   U2S75_RS17740 Genome accession   NZ_CP140420
Coordinates   3713546..3715591 (+) Length   681 a.a.
NCBI ID   WP_000204953.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 2023CK-00893     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3708546..3720591
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  U2S75_RS17725 (U2S75_17720) plsB 3709027..3711600 (+) 2574 WP_064193070.1 glycerol-3-phosphate 1-O-acyltransferase PlsB -
  U2S75_RS17730 (U2S75_17725) adeT2 3711644..3712630 (-) 987 WP_064193071.1 putative multidrug efflux protein AdeT2 -
  U2S75_RS17735 (U2S75_17730) - 3712710..3713525 (-) 816 WP_000547774.1 NAD-dependent epimerase/dehydratase family protein -
  U2S75_RS17740 (U2S75_17735) recG 3713546..3715591 (+) 2046 WP_000204953.1 ATP-dependent DNA helicase RecG Machinery gene
  U2S75_RS17745 (U2S75_17740) comF 3715584..3716219 (+) 636 WP_000472270.1 ComF family protein Machinery gene
  U2S75_RS17750 (U2S75_17745) - 3716222..3716623 (-) 402 WP_057054116.1 NUDIX domain-containing protein -
  U2S75_RS17755 (U2S75_17750) - 3716638..3717219 (-) 582 WP_001084310.1 TIGR00730 family Rossman fold protein -
  U2S75_RS17760 (U2S75_17755) - 3717377..3718390 (+) 1014 WP_000888321.1 CorA family divalent cation transporter -
  U2S75_RS17765 (U2S75_17760) - 3718460..3718747 (-) 288 WP_064193072.1 lipid asymmetry maintenance protein MlaB -
  U2S75_RS17770 (U2S75_17765) - 3718759..3719400 (-) 642 WP_001093907.1 phospholipid-binding protein MlaC -
  U2S75_RS17775 (U2S75_17770) - 3719427..3720107 (-) 681 WP_000842362.1 outer membrane lipid asymmetry maintenance protein MlaD -

Sequence

Protein


Download         Length: 681 a.a.        Molecular weight: 76435.01 Da        Isoelectric Point: 7.7343

>NTDB_id=834684 U2S75_RS17740 WP_000204953.1 3713546..3715591(+) (recG) [Acinetobacter baumannii strain 2023CK-00893]
MTSVHQLQGVGSASAALLEKLNIFTTDDLLFHLPRDYEDRSTIIPMNQLVVGRSYLLEGEVKSVDFPPGKRKSMAALIQD
EFGKVTLRFYHIYKNLTDKIKPGNRLRIFGEVRVGARGLELYHPEIQLINEHTPLPKTQLTAIYPSTDGLTQAKLREYVK
QALKHHSDALPELLPKQYTNGYALKEALHYIHEPPVDANMIQLAQGSHPAQQRLIFEELVAHQISLLTRRAYIRQIASPA
FPSSKVLAKKLLEALPFQMTNAQKRVSKEILNDLKQHQPMLRLVQGDVGAGKTLVAAVAACHALEADWQVALMAPTEILA
EQHYLNFKRWFEPLGITVAWLSGKQKGKARAHAEQQIKEGHAELIVGTHALFQDNVEFAKLGLVIIDEQHRFGVDQRLAL
RNKGAEQLTPHQLVMTATPIPRTLAMSAYGDLDTSIIDELPPGRTPIQTVTIPLDRREEVLHRIASNCREGKQAYWVCTL
VEQSETLDAQAAEATYQEMKERFPELNIGLVHGKMKADEKQAVMQAFKNNELQLLIATTVIEVGVDVPNASIMVIENAER
LGLSQLHQLRGRVGRGAKASFCVLLYKPPLSQNGQERLSILRESNDGFVIAEKDLELRGPGELLGTKQTGDMGFRVARLE
RDDHLLSQAHYVAQQVLKDYPEQADALLKRWLPEAPRYAYV

Nucleotide


Download         Length: 2046 bp        

>NTDB_id=834684 U2S75_RS17740 WP_000204953.1 3713546..3715591(+) (recG) [Acinetobacter baumannii strain 2023CK-00893]
ATGACTTCAGTCCATCAGTTACAAGGCGTTGGATCGGCTTCAGCAGCCCTACTCGAAAAACTAAATATTTTTACCACAGA
TGATTTGCTGTTTCATCTGCCCCGTGATTATGAAGATCGCAGTACCATTATTCCTATGAATCAATTGGTGGTTGGTCGTA
GTTATTTACTCGAGGGTGAAGTCAAATCTGTTGATTTCCCTCCAGGTAAACGTAAATCTATGGCCGCATTAATACAAGAT
GAATTTGGTAAGGTGACTTTACGCTTTTATCATATTTATAAAAATTTAACCGACAAAATAAAACCTGGTAACCGTTTACG
TATTTTTGGTGAAGTTCGCGTAGGTGCACGAGGGCTTGAGCTTTATCATCCAGAAATTCAACTTATTAATGAACATACAC
CACTACCAAAAACACAGCTCACTGCAATTTATCCAAGTACCGATGGCCTAACACAAGCTAAATTACGCGAATATGTTAAA
CAAGCGTTGAAGCATCATAGTGATGCCTTACCCGAGTTACTCCCTAAACAATATACAAATGGGTATGCACTCAAAGAAGC
TTTACATTACATTCATGAGCCACCAGTTGATGCCAATATGATCCAATTGGCTCAAGGCTCTCATCCTGCGCAGCAACGTC
TTATTTTTGAAGAGCTGGTCGCACATCAAATTAGTCTTCTCACTCGACGTGCTTATATTCGCCAAATTGCTTCACCTGCT
TTTCCGAGTAGTAAAGTACTTGCAAAAAAACTGCTAGAAGCTTTACCTTTTCAAATGACCAACGCACAAAAACGTGTATC
AAAAGAAATTTTAAACGACTTAAAACAACATCAACCTATGCTACGTTTGGTACAAGGTGATGTAGGGGCTGGAAAAACTT
TAGTTGCAGCGGTTGCAGCATGTCATGCATTGGAAGCAGATTGGCAAGTTGCTTTAATGGCACCTACCGAAATTTTAGCA
GAGCAGCATTATTTAAATTTTAAACGCTGGTTTGAACCTTTAGGTATTACGGTAGCTTGGTTGTCGGGTAAACAAAAAGG
GAAAGCGCGGGCACACGCTGAGCAACAAATTAAAGAAGGCCATGCTGAACTGATCGTGGGCACCCATGCCTTATTTCAAG
ATAACGTTGAGTTTGCAAAACTAGGACTCGTGATTATTGATGAACAGCACCGATTCGGGGTCGATCAGCGATTAGCCTTA
CGCAATAAAGGCGCCGAACAGCTCACCCCACATCAACTGGTCATGACTGCAACGCCAATTCCTAGAACACTGGCAATGAG
TGCTTATGGCGATTTAGATACATCAATTATTGATGAATTACCGCCAGGTCGAACTCCAATTCAGACCGTCACAATTCCGC
TAGATCGTCGTGAAGAAGTACTGCATCGAATTGCTTCAAACTGCCGAGAAGGTAAACAAGCCTACTGGGTATGTACTCTG
GTTGAACAGTCCGAAACTTTAGATGCTCAAGCCGCCGAAGCCACTTATCAAGAAATGAAAGAGCGCTTTCCTGAACTTAA
TATTGGTTTGGTTCATGGCAAAATGAAAGCCGATGAAAAACAGGCTGTCATGCAAGCATTTAAAAACAATGAACTACAGT
TGCTAATTGCCACAACTGTTATTGAGGTTGGGGTAGATGTACCTAACGCTTCGATTATGGTCATTGAGAATGCTGAACGA
TTAGGGCTTTCACAGCTACACCAATTACGAGGGCGTGTAGGACGAGGTGCAAAAGCCAGTTTTTGTGTTCTTCTCTATAA
ACCACCACTTTCACAAAATGGGCAAGAAAGACTTTCAATTTTAAGAGAAAGTAATGATGGCTTTGTTATTGCTGAAAAAG
ATCTTGAGCTAAGAGGCCCGGGTGAGTTATTAGGAACAAAACAAACAGGTGATATGGGTTTCCGTGTCGCACGTTTAGAG
CGAGATGATCATTTATTGAGTCAAGCACACTACGTTGCACAACAAGTTCTAAAAGATTACCCTGAGCAAGCTGATGCCTT
ATTGAAGCGCTGGCTTCCCGAAGCTCCTCGATATGCATATGTTTAA

Domains

Predicted by InterProScan.

Helicase conserved C-terminal domain (Helicase_C)

(466-576)

ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C)

(605-663)

DEAD/DEAH box helicase (DEAD)

(262-422)

RecG wedge domain (RecG_wedge)

(7-163)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recG Neisseria meningitidis strain C311

49.925

98.238

0.49
  recG/mmsA Streptococcus pneumoniae R6

41.504

97.651

0.405
  recG/mmsA Streptococcus pneumoniae R36A

41.504

97.651

0.405
  recG Bacillus subtilis subsp. subtilis str. 168

38.574

100

0.389