Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   QNK07_RS19470 Genome accession   NZ_CP125981
Coordinates   3741850..3741969 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain ZKY06     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3736850..3746969
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QNK07_RS19445 (QNK07_19460) albG 3737014..3737715 (+) 702 WP_015250988.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  QNK07_RS19450 (QNK07_19465) ywhL 3737721..3739097 (-) 1377 WP_032722701.1 YncE family protein -
  QNK07_RS19455 (QNK07_19470) ywhK 3739136..3740491 (-) 1356 WP_032722703.1 YncE family protein -
  QNK07_RS19460 - 3740488..3740718 (-) 231 WP_009968328.1 hypothetical protein -
  QNK07_RS19465 (QNK07_19475) rapF 3740721..3741866 (+) 1146 WP_003227549.1 response regulator aspartate phosphatase RapF Regulator
  QNK07_RS19470 (QNK07_19480) phrF 3741850..3741969 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  QNK07_RS19475 (QNK07_19485) - 3742083..3742533 (+) 451 Protein_3777 YbaK/EbsC family protein -
  QNK07_RS19480 (QNK07_19490) speB 3742565..3743437 (-) 873 WP_032722706.1 agmatinase -
  QNK07_RS19485 (QNK07_19495) speE 3743498..3744328 (-) 831 WP_003227543.1 spermidine synthase -
  QNK07_RS19490 (QNK07_19500) pbpG 3744530..3746605 (+) 2076 WP_003227540.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=833944 QNK07_RS19470 WP_009968329.1 3741850..3741969(+) (phrF) [Bacillus subtilis strain ZKY06]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=833944 QNK07_RS19470 WP_009968329.1 3741850..3741969(+) (phrF) [Bacillus subtilis strain ZKY06]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487