Detailed information NTG0833943

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QNK07_RS19465
• Genome accession: NZ_CP125981
• Coordinates: 3740721..3741866 (+)
• Length: 381 a.a.
• NCBI ID: WP_003227549.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain ZKY06
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3735721..3746866

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QNK07_RS19440 (QNK07_19455)	albF	3735737..3737017 (+)	1281	WP_032722698.1	M16 family metallopeptidase	-
QNK07_RS19445 (QNK07_19460)	albG	3737014..3737715 (+)	702	WP_015250988.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
QNK07_RS19450 (QNK07_19465)	ywhL	3737721..3739097 (-)	1377	WP_032722701.1	YncE family protein	-
QNK07_RS19455 (QNK07_19470)	ywhK	3739136..3740491 (-)	1356	WP_032722703.1	YncE family protein	-
QNK07_RS19460	-	3740488..3740718 (-)	231	WP_009968328.1	hypothetical protein	-
QNK07_RS19465 (QNK07_19475)	rapF	3740721..3741866 (+)	1146	WP_003227549.1	response regulator aspartate phosphatase RapF	Regulator
QNK07_RS19470 (QNK07_19480)	phrF	3741850..3741969 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
QNK07_RS19475 (QNK07_19485)	-	3742083..3742533 (+)	451	Protein_3777	YbaK/EbsC family protein	-
QNK07_RS19480 (QNK07_19490)	speB	3742565..3743437 (-)	873	WP_032722706.1	agmatinase	-
QNK07_RS19485 (QNK07_19495)	speE	3743498..3744328 (-)	831	WP_003227543.1	spermidine synthase	-
QNK07_RS19490 (QNK07_19500)	pbpG	3744530..3746605 (+)	2076	WP_003227540.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45609.09 Da
• Isoelectric Point: 5.1503

>NTDB_id=833943 QNK07_RS19465 WP_003227549.1 3740721..3741866(+) (rapF) [Bacillus subtilis strain ZKY06]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKIDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=833943 QNK07_RS19465 WP_003227549.1 3740721..3741866(+) (rapF) [Bacillus subtilis strain ZKY06]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATAGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572