Detailed information NTG0832914

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QMY17_RS03255
• Genome accession: NZ_CP125812
• Coordinates: 628871..630028 (+)
• Length: 385 a.a.
• NCBI ID: WP_003227983.1
• Uniprot ID: A0A199WDV9
• Organism: Bacillus subtilis strain N3378-3At
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 623871..635028

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMY17_RS03225	-	624085..624864 (-)	780	WP_014481059.1	hypothetical protein	-
QMY17_RS03230	-	624940..625392 (-)	453	WP_014481058.1	hypothetical protein	-
QMY17_RS03235	-	625443..625898 (-)	456	WP_014481057.1	hypothetical protein	-
QMY17_RS03240	-	625947..626402 (-)	456	WP_041516563.1	hypothetical protein	-
QMY17_RS03245	-	627009..628001 (-)	993	WP_014481056.1	LCP family protein	-
QMY17_RS03250	-	628001..628654 (-)	654	WP_014481055.1	YigZ family protein	-
QMY17_RS03255	degS	628871..630028 (+)	1158	WP_003227983.1	two-component sensor histidine kinase DegS	Regulator
QMY17_RS03260	degU	630111..630800 (+)	690	WP_014481054.1	two-component system response regulator DegU	Regulator
QMY17_RS03265	fakBA	630898..631743 (+)	846	WP_014481053.1	DegV family protein	-
QMY17_RS03270	comFA	631850..633241 (+)	1392	WP_014481052.1	ATP-dependent helicase ComFA	Machinery gene
QMY17_RS03275	comFB	633301..633597 (+)	297	WP_003227989.1	late competence protein ComFB	-
QMY17_RS03280	comFC	633561..634283 (+)	723	WP_014481051.1	comF operon protein ComFC	Machinery gene
QMY17_RS03285	yvyF	634356..634775 (+)	420	WP_014481050.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44957.76 Da
• Isoelectric Point: 6.2957

>NTDB_id=832914 QMY17_RS03255 WP_003227983.1 628871..630028(+) (degS) [Bacillus subtilis strain N3378-3At]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=832914 QMY17_RS03255 WP_003227983.1 628871..630028(+) (degS) [Bacillus subtilis strain N3378-3At]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAAGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGGATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

3D structure

• AlphaFold DB: A0A199WDV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	100	100	1