Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | QMO72_RS06860 | Genome accession | NZ_CP125718 |
| Coordinates | 1406890..1407207 (+) | Length | 105 a.a. |
| NCBI ID | WP_107554245.1 | Uniprot ID | - |
| Organism | Staphylococcus casei strain DSM 15096 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1401890..1412207
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMO72_RS06835 (QMO72_06835) | - | 1402785..1403771 (+) | 987 | WP_103267788.1 | glucokinase | - |
| QMO72_RS06840 (QMO72_06840) | - | 1403771..1404094 (+) | 324 | WP_046836546.1 | MTH1187 family thiamine-binding protein | - |
| QMO72_RS06845 (QMO72_06845) | - | 1404096..1404719 (+) | 624 | WP_103267789.1 | MBL fold metallo-hydrolase | - |
| QMO72_RS06850 (QMO72_06850) | comGA | 1404853..1405827 (+) | 975 | WP_103267790.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| QMO72_RS06855 (QMO72_06855) | comGB | 1405799..1406866 (+) | 1068 | WP_103267791.1 | competence type IV pilus assembly protein ComGB | - |
| QMO72_RS06860 (QMO72_06860) | comGC | 1406890..1407207 (+) | 318 | WP_107554245.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| QMO72_RS06865 (QMO72_06865) | comGD | 1407188..1407631 (+) | 444 | WP_286093269.1 | competence type IV pilus minor pilin ComGD | - |
| QMO72_RS06870 (QMO72_06870) | - | 1407618..1407917 (+) | 300 | WP_103266285.1 | hypothetical protein | - |
| QMO72_RS06875 (QMO72_06875) | comGF | 1407889..1408332 (+) | 444 | WP_286093165.1 | competence type IV pilus minor pilin ComGF | - |
| QMO72_RS06880 (QMO72_06880) | - | 1408497..1409012 (+) | 516 | WP_103266286.1 | shikimate kinase | - |
| QMO72_RS06885 (QMO72_06885) | gcvT | 1409194..1410285 (+) | 1092 | WP_103266287.1 | glycine cleavage system aminomethyltransferase GcvT | - |
| QMO72_RS06890 (QMO72_06890) | gcvPA | 1410303..1411655 (+) | 1353 | WP_103266288.1 | aminomethyl-transferring glycine dehydrogenase subunit GcvPA | - |
Sequence
Protein
Download Length: 105 a.a. Molecular weight: 11771.01 Da Isoelectric Point: 9.0956
>NTDB_id=832470 QMO72_RS06860 WP_107554245.1 1406890..1407207(+) (comGC) [Staphylococcus casei strain DSM 15096]
MKKQFKIFNKDAFTLIEMLLVLLIISLLLILIIPNIAKQSKHIQATGCEAQLKMIDSQIEAYTLKFNKKPTSIDDLVTEG
YIKENQKQCKSGAMITISNGEAIAN
MKKQFKIFNKDAFTLIEMLLVLLIISLLLILIIPNIAKQSKHIQATGCEAQLKMIDSQIEAYTLKFNKKPTSIDDLVTEG
YIKENQKQCKSGAMITISNGEAIAN
Nucleotide
Download Length: 318 bp
>NTDB_id=832470 QMO72_RS06860 WP_107554245.1 1406890..1407207(+) (comGC) [Staphylococcus casei strain DSM 15096]
ATGAAAAAACAATTTAAAATTTTTAACAAAGATGCTTTTACATTAATTGAAATGTTGCTAGTACTACTCATTATTAGTTT
ATTATTAATTTTAATTATTCCAAATATTGCAAAACAATCTAAACATATACAAGCTACAGGTTGTGAAGCGCAACTTAAAA
TGATAGACAGCCAAATAGAAGCTTATACATTAAAATTCAATAAAAAACCTACATCTATAGACGATTTGGTCACTGAAGGC
TACATAAAAGAAAATCAGAAACAATGTAAGTCAGGTGCTATGATAACAATTAGTAATGGTGAAGCTATTGCGAACTAG
ATGAAAAAACAATTTAAAATTTTTAACAAAGATGCTTTTACATTAATTGAAATGTTGCTAGTACTACTCATTATTAGTTT
ATTATTAATTTTAATTATTCCAAATATTGCAAAACAATCTAAACATATACAAGCTACAGGTTGTGAAGCGCAACTTAAAA
TGATAGACAGCCAAATAGAAGCTTATACATTAAAATTCAATAAAAAACCTACATCTATAGACGATTTGGTCACTGAAGGC
TACATAAAAGAAAATCAGAAACAATGTAAGTCAGGTGCTATGATAACAATTAGTAATGGTGAAGCTATTGCGAACTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Staphylococcus aureus MW2 |
73.529 |
97.143 |
0.714 |
| comGC | Staphylococcus aureus N315 |
73.529 |
97.143 |
0.714 |
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
42.553 |
89.524 |
0.381 |
| comYC | Streptococcus mutans UA140 |
45.238 |
80 |
0.362 |
| comYC | Streptococcus mutans UA159 |
45.238 |
80 |
0.362 |