Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   QLH32_RS07405 Genome accession   NZ_CP125669
Coordinates   1554390..1554773 (-) Length   127 a.a.
NCBI ID   WP_004640629.1    Uniprot ID   -
Organism   Acinetobacter sp. KCTC 92772     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1549390..1559773
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLH32_RS07390 (QLH32_07390) - 1551305..1553386 (-) 2082 WP_283268915.1 methyl-accepting chemotaxis protein -
  QLH32_RS07395 (QLH32_07395) - 1553433..1553969 (-) 537 WP_004681658.1 chemotaxis protein CheW -
  QLH32_RS07400 (QLH32_07400) - 1554009..1554371 (-) 363 WP_004664659.1 response regulator -
  QLH32_RS07405 (QLH32_07405) pilG 1554390..1554773 (-) 384 WP_004640629.1 twitching motility response regulator PilG Regulator
  QLH32_RS07410 (QLH32_07410) - 1555055..1555738 (+) 684 WP_283268920.1 hypothetical protein -
  QLH32_RS07415 (QLH32_07415) - 1555917..1557632 (+) 1716 WP_283268921.1 proline--tRNA ligase -
  QLH32_RS07420 (QLH32_07420) - 1557686..1558021 (-) 336 WP_267982080.1 YegP family protein -
  QLH32_RS07425 (QLH32_07425) - 1558182..1558526 (-) 345 WP_283268922.1 zinc ribbon domain-containing protein YjdM -
  QLH32_RS07430 (QLH32_07430) - 1558610..1558966 (-) 357 WP_283268924.1 DUF488 family protein -
  QLH32_RS07435 (QLH32_07435) - 1558988..1559311 (-) 324 WP_283268925.1 DUF2004 domain-containing protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14199.33 Da        Isoelectric Point: 4.7278

>NTDB_id=832331 QLH32_RS07405 WP_004640629.1 1554390..1554773(-) (pilG) [Acinetobacter sp. KCTC 92772]
MEDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSLNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLSAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=832331 QLH32_RS07405 WP_004640629.1 1554390..1554773(-) (pilG) [Acinetobacter sp. KCTC 92772]
ATGGAAGATAAATTTCAAAATTTGAAAGTAATGGTGATTGACGATTCAAAAACGATTCGCCGTACAGCCGAGACTTTGTT
GCAACGAGAAGGCTGTGAAGTCATTACGGCGGTCGATGGTTTTGAAGCATTATCAAAAATTGCGGAAGCAAATCCAGATA
TCGTTTTCGTTGATATCATGATGCCACGCCTGGACGGTTATCAGACCTGTGCATTGATTAAGAACTCTTTAAACTACCAA
AATATTCCAGTGATTATGTTGTCAAGCAAAGACGGTTTGTTTGATCAGGCTAAAGGGCGTGTTGTGGGGTCGGATGAATA
TTTAACCAAGCCATTCAGTAAAGATGAGCTGTTAAGTGCGATTCGTAACCACGTTAGCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.85

100

0.969
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37