Detailed information NTG0831679

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: QMK54_RS23660
• Genome accession: NZ_CP125380
• Coordinates: 5354132..5356366 (-)
• Length: 744 a.a.
• NCBI ID: WP_320401448.1
• Uniprot ID: -
• Organism: Pseudomonas sp. P5_109
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 5349132..5361366

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMK54_RS23625 (QMK54_23605)	murB	5349512..5350531 (-)	1020	WP_223593574.1	UDP-N-acetylmuramate dehydrogenase	-
QMK54_RS23630 (QMK54_23610)	-	5350528..5350992 (-)	465	WP_320401445.1	low molecular weight protein-tyrosine-phosphatase	-
QMK54_RS23635 (QMK54_23615)	kdsB	5350992..5351756 (-)	765	WP_320401446.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
QMK54_RS23640 (QMK54_23620)	-	5351753..5351938 (-)	186	WP_003179363.1	Trm112 family protein	-
QMK54_RS23645 (QMK54_23625)	lpxK	5351963..5352973 (-)	1011	WP_320401447.1	tetraacyldisaccharide 4'-kinase	-
QMK54_RS23650 (QMK54_23630)	-	5352973..5353401 (-)	429	WP_223593586.1	ExbD/TolR family protein	-
QMK54_RS23655 (QMK54_23635)	exbB	5353398..5354033 (-)	636	WP_110660228.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
QMK54_RS23660 (QMK54_23640)	comA	5354132..5356366 (-)	2235	WP_320401448.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
QMK54_RS23665 (QMK54_23645)	-	5356501..5357016 (+)	516	WP_320401449.1	DUF2062 domain-containing protein	-
QMK54_RS23670 (QMK54_23650)	-	5357169..5357948 (-)	780	WP_223593593.1	ABC transporter permease	-
QMK54_RS23675 (QMK54_23655)	-	5357945..5358877 (-)	933	WP_223593603.1	ABC transporter ATP-binding protein	-
QMK54_RS23680 (QMK54_23660)	-	5359010..5359633 (-)	624	WP_223593605.1	glutathione S-transferase family protein	-
QMK54_RS23685 (QMK54_23665)	-	5359677..5360336 (-)	660	WP_320401450.1	transglutaminase family protein	-

Sequence

Protein

• Length: 744 a.a.
• Molecular weight: 82300.76 Da
• Isoelectric Point: 10.2446

>NTDB_id=831679 QMK54_RS23660 WP_320401448.1 5354132..5356366(-) (comA) [Pseudomonas sp. P5_109]
MRTGMMALALGLLTLRFLPALPPVWLWLAMPVAGLMLLPFRTYPVAFYLFGLSWACANAQWALDDRLPPVLDGETRWVEG
RVTGLPRHDDGVVRFELTDIQSRRTRLPRQMRLAWYGGPPVNSGERWRLAVKLKRPVGLLNPQAFDYQAWLLAQRIGATG
TVKQGERLAPAQWAWRDGIRQRLLAVDAQGRSGALTALVLGDGAGLSREDWQVLQDTGTVHLLVISGQHIGLLAGVVYLL
IAGLARFGLWPNRLPWLPWACGLAFAAALGYGMLAGFGVPVRRACLMIGLVLLWRLRFRHLGAWWPLLLALNGILLLEPL
ASLQPGFWLSFAAVAVLILTFGGRLGPWRWWQTWARAQWLIAIGLCPLLLALGLPISLSGPLANLFAVPWISLVVLPPAL
LGTLLLPVSYVGEKLLWLAGGLIDWWFRGLGLIAGQVPAWVPTAVPLWAWLIGAFGAVLLLLPRGVPMRPLGWPMLLMLV
FAPRPMLPEGMAEVWQLDVGQGLAILVRTRHHAMLYDAGPRFGELDQGERVVLPALRKLGVKDLDLMLISHAHADHAGGA
RAVTKGLPVNRVVSGEPSDLPVELRAERCESGRQWTWDEVDFQLWHWPLAGDSNQNSCVLLIEANGERLLLSGDIDAAAE
RALLDSPLALPTDWLQAPHHGSRSSSSNALLEVLQPKGVLISRGQGNSFGHPHPTVIARYQKRGMAIYDSVEQGAIRLQL
GRFEPPWSMRQERRFWRDPPPLHQ

Nucleotide

• Length: 2235 bp

>NTDB_id=831679 QMK54_RS23660 WP_320401448.1 5354132..5356366(-) (comA) [Pseudomonas sp. P5_109]
ATGCGCACAGGGATGATGGCGCTGGCGCTGGGTCTTTTGACCTTGCGTTTTTTACCGGCATTACCGCCGGTCTGGTTGTG
GCTGGCGATGCCGGTGGCGGGTTTGATGTTGCTGCCGTTCAGGACCTATCCGGTGGCGTTTTACCTGTTCGGCTTGAGTT
GGGCCTGCGCCAATGCGCAGTGGGCGCTGGATGACCGACTGCCACCGGTGCTGGACGGAGAAACCCGCTGGGTCGAAGGG
CGGGTCACTGGCTTGCCCCGGCATGACGACGGTGTGGTGCGTTTCGAATTGACCGACATCCAGTCCCGGCGTACCCGGCT
GCCGCGGCAAATGCGTCTGGCCTGGTACGGCGGGCCGCCGGTGAACAGTGGTGAGCGCTGGCGCCTGGCAGTCAAATTGA
AGCGCCCGGTCGGGCTCCTCAATCCGCAGGCGTTCGATTACCAGGCCTGGTTGCTGGCACAACGCATCGGGGCAACCGGG
ACGGTCAAGCAGGGTGAGCGCCTGGCGCCAGCTCAATGGGCCTGGCGCGATGGAATCCGCCAGCGATTGCTGGCGGTGGA
TGCCCAAGGGCGAAGCGGCGCGTTGACCGCATTGGTACTCGGGGACGGCGCCGGGCTAAGTCGCGAAGACTGGCAGGTAC
TGCAGGACACCGGCACGGTGCATCTGTTGGTGATTTCCGGACAGCATATCGGGTTGCTGGCGGGCGTTGTGTATCTTCTG
ATCGCGGGCCTGGCCCGTTTTGGGTTATGGCCGAACCGTTTGCCATGGTTGCCTTGGGCATGTGGCCTGGCATTCGCCGC
GGCGCTCGGTTACGGGATGCTGGCCGGTTTCGGGGTGCCGGTACGACGGGCCTGCCTGATGATTGGCCTGGTGTTGTTGT
GGCGTCTACGGTTCCGTCATCTCGGTGCTTGGTGGCCACTGTTGTTGGCACTCAACGGCATTTTGCTGCTGGAGCCCCTG
GCGAGTCTTCAGCCTGGCTTCTGGCTGTCGTTCGCTGCCGTTGCAGTCTTGATCTTGACCTTTGGCGGCCGTTTGGGACC
GTGGCGCTGGTGGCAAACCTGGGCCCGTGCCCAGTGGCTGATTGCAATCGGGTTGTGCCCGTTGTTACTGGCACTGGGAT
TGCCAATCAGCCTCAGCGGGCCGCTGGCCAATTTGTTCGCCGTGCCCTGGATCAGTCTGGTGGTGCTGCCACCGGCATTG
CTCGGGACTCTATTGCTACCGGTGTCCTATGTGGGTGAGAAATTGCTGTGGCTGGCGGGCGGCTTGATCGACTGGTGGTT
CAGGGGATTGGGACTCATTGCCGGTCAGGTTCCCGCCTGGGTGCCCACGGCGGTTCCGCTATGGGCCTGGTTGATCGGTG
CCTTTGGCGCTGTTCTGCTATTACTGCCGCGAGGCGTACCGATGCGCCCGTTAGGGTGGCCCATGCTGTTGATGCTGGTT
TTTGCGCCTAGGCCGATGTTGCCGGAAGGCATGGCCGAAGTCTGGCAACTGGATGTCGGCCAGGGCCTGGCGATCCTGGT
GCGCACCCGGCATCACGCGATGCTGTATGACGCCGGACCGCGTTTCGGTGAACTCGACCAGGGGGAGCGGGTGGTGCTGC
CGGCGTTGCGCAAACTGGGGGTGAAGGACCTCGACCTGATGCTGATCAGCCACGCCCATGCCGACCACGCCGGTGGTGCC
CGGGCGGTTACCAAGGGCTTGCCGGTGAACCGGGTGGTCAGTGGTGAGCCGTCGGACTTGCCTGTGGAGTTACGGGCCGA
GCGTTGTGAGAGCGGTCGACAATGGACCTGGGATGAAGTCGATTTCCAGCTTTGGCACTGGCCATTGGCCGGGGACAGCA
ACCAGAACTCCTGCGTCTTGCTGATCGAGGCCAATGGCGAACGGTTGCTGTTGAGTGGCGACATCGATGCCGCCGCCGAG
CGCGCTTTGCTGGACAGTCCGTTGGCCCTGCCCACCGATTGGCTGCAGGCGCCACACCACGGCAGTCGCAGTTCTTCGTC
AAACGCCCTGCTGGAGGTCTTGCAACCCAAAGGGGTGCTGATCTCACGCGGTCAGGGCAATTCGTTTGGCCATCCGCATC
CCACGGTCATCGCGCGTTATCAAAAACGTGGAATGGCGATCTACGACAGCGTCGAACAGGGTGCCATTCGTCTGCAACTG
GGGCGCTTCGAGCCGCCGTGGTCAATGCGCCAGGAACGGCGTTTCTGGCGCGATCCGCCGCCTTTGCACCAATAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (23-167)

• Competence protein (Competence) (198-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-681)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	63.114	95.833	0.605
comA	Ralstonia pseudosolanacearum GMI1000	33.497	100	0.367