Detailed information NTG0831589

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: QMK58_RS07320
• Genome accession: NZ_CP125377
• Coordinates: 1628606..1630840 (+)
• Length: 744 a.a.
• NCBI ID: WP_320396085.1
• Uniprot ID: -
• Organism: Pseudomonas sp. P8_241
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1623606..1635840

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QMK58_RS07295 (QMK58_07315)	-	1624377..1625036 (+)	660	WP_053161951.1	transglutaminase-like domain-containing protein	-
QMK58_RS07300 (QMK58_07320)	-	1625080..1625703 (+)	624	WP_053161949.1	glutathione S-transferase family protein	-
QMK58_RS07305 (QMK58_07325)	-	1625837..1626769 (+)	933	WP_053161948.1	ABC transporter ATP-binding protein	-
QMK58_RS07310 (QMK58_07330)	-	1626766..1627545 (+)	780	WP_053161946.1	ABC transporter permease	-
QMK58_RS07315 (QMK58_07335)	-	1627954..1628469 (-)	516	WP_053161944.1	DUF2062 domain-containing protein	-
QMK58_RS07320 (QMK58_07340)	comA	1628606..1630840 (+)	2235	WP_320396085.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
QMK58_RS07325 (QMK58_07345)	exbB	1630939..1631574 (+)	636	WP_053161940.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
QMK58_RS07330 (QMK58_07350)	-	1631571..1631999 (+)	429	WP_053161938.1	ExbD/TolR family protein	-
QMK58_RS07335 (QMK58_07355)	lpxK	1631999..1633009 (+)	1011	WP_053161936.1	tetraacyldisaccharide 4'-kinase	-
QMK58_RS07340 (QMK58_07360)	-	1633034..1633219 (+)	186	WP_003179363.1	Trm112 family protein	-
QMK58_RS07345 (QMK58_07365)	kdsB	1633216..1633980 (+)	765	WP_053161934.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
QMK58_RS07350 (QMK58_07370)	-	1633980..1634444 (+)	465	WP_053161933.1	low molecular weight protein-tyrosine-phosphatase	-
QMK58_RS07355 (QMK58_07375)	murB	1634441..1635460 (+)	1020	WP_053161931.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 744 a.a.
• Molecular weight: 82151.52 Da
• Isoelectric Point: 10.6531

>NTDB_id=831589 QMK58_RS07320 WP_320396085.1 1628606..1630840(+) (comA) [Pseudomonas sp. P8_241]
MRIGMMALALGLLALRFLPALPPVWLWWVMPVGGLMLLPFRMYPVAFFLFGFSWACASAQWAMDERLTPALDGETRWIEG
RVTGLPRHDDGVVRFELSNSLSRRVRLPQKMRLAWYGGPPVSSGERWRLAVKLKRPVGLLNPHAFDYEAWLLAQRIGATG
TVKDGQRLMPASGAWRDAVRQRLQTVDAQGRTGALIALVLGDGAGLTREDWQVLQDSGTVHLLVISGQHIGLLAGLIYLL
IAGMARLGLWPSRLPWLPWACGLAFAAALGYALLAGFGVPVRRACLMIGLVLLWRLRFRHHSAWWALLLALNGVLLFDPL
TSLLPGFWLSFAAVAVLVFTFAGRLGPWRWWQTWTRAQWLIAIGLCPLLLALGLPVSLSGPLANLFAVPWVSLVVLPPAL
LGTLLLPVPFVGEGLLWLAGGLIDGWFRGLRLVSGQVPAWVPAAVPLWAWAIGAVGAFLLLLPRGVPMRPLGWPMLLMLV
FAPRTMVQEGIAEVWQLDVGQGLAILVRTRHHTLLFDAGPRFGELDQGERVVLPALRKLGVEDLDLMLISHAHADHAGGA
QSVAKGLPVKQVISGEPSDLPAQLRAGRCESGRRWTWDSVDFQLWHWPLASDSNQNSCVLLIEANGERLLLSGDIDVFAE
RALLDSPMAVPIDWLQAPHHGSRSSSSKALLNVLQPKGALISRGQGNSFGHPHPTVIQRYRNRDMAIYDSAEQGAIRLQL
GRFEAPWTMRQERRFWREPAPQSQ

Nucleotide

• Length: 2235 bp

>NTDB_id=831589 QMK58_RS07320 WP_320396085.1 1628606..1630840(+) (comA) [Pseudomonas sp. P8_241]
ATGCGCATAGGGATGATGGCGCTGGCGCTGGGATTGTTGGCCTTGCGTTTTTTACCGGCACTACCGCCGGTCTGGTTGTG
GTGGGTGATGCCGGTGGGGGGTTTGATGTTGCTGCCGTTCAGGATGTACCCGGTGGCGTTTTTTCTGTTCGGGTTCAGTT
GGGCCTGCGCAAGTGCGCAATGGGCCATGGATGAACGGTTAACACCGGCGCTGGATGGGGAAACCCGCTGGATCGAAGGT
CGAGTGACCGGTTTGCCCCGGCATGATGACGGTGTCGTTCGATTCGAGTTGAGCAACAGCCTGTCCCGCCGCGTCCGCCT
GCCGCAAAAAATGCGTCTGGCCTGGTACGGCGGACCGCCGGTGAGCAGCGGTGAGCGCTGGCGCCTGGCAGTCAAGTTGA
AGCGTCCGGTGGGGCTGCTCAACCCCCACGCCTTCGACTACGAGGCCTGGCTACTGGCACAACGCATTGGGGCAACCGGG
ACGGTCAAGGATGGTCAACGTCTTATGCCGGCGAGTGGAGCTTGGCGTGATGCTGTTCGTCAGCGTTTGCAGACCGTGGA
TGCCCAGGGAAGGACCGGAGCGCTGATTGCGCTGGTCCTCGGAGACGGTGCCGGGCTGACGCGTGAGGACTGGCAAGTGT
TGCAGGACAGCGGCACCGTGCACCTGTTGGTGATCTCCGGGCAGCACATCGGTTTGCTTGCCGGGCTCATCTATTTGTTG
ATCGCCGGCATGGCCCGCCTTGGCCTGTGGCCCAGTCGACTGCCGTGGTTACCTTGGGCGTGCGGGCTGGCGTTTGCCGC
CGCACTCGGCTACGCACTGCTTGCCGGGTTCGGAGTGCCGGTAAGACGGGCCTGCCTGATGATCGGTCTGGTGTTGTTGT
GGCGTCTGCGTTTTCGTCACCACAGCGCCTGGTGGGCGCTGCTGCTGGCGCTCAATGGCGTTCTGTTGTTCGATCCGCTG
ACCAGCTTGCTCCCCGGGTTCTGGTTGTCTTTTGCTGCAGTGGCGGTATTGGTCTTTACATTCGCAGGCCGTCTGGGACC
TTGGCGATGGTGGCAGACCTGGACCCGTGCCCAGTGGTTGATCGCGATCGGGCTGTGCCCATTGTTACTCGCATTGGGAT
TGCCAGTCAGCCTGAGCGGCCCACTGGCCAATTTGTTTGCGGTGCCCTGGGTCAGTCTGGTGGTGCTTCCCCCTGCGTTG
CTCGGGACGCTGCTGCTGCCCGTGCCTTTTGTGGGGGAGGGATTGCTGTGGCTGGCGGGCGGTTTGATCGATGGGTGGTT
CAGGGGGCTGCGGCTGGTGTCCGGTCAGGTTCCCGCATGGGTGCCCGCGGCCGTTCCGCTCTGGGCCTGGGCAATCGGTG
CCGTTGGCGCCTTTTTGCTATTACTGCCCCGAGGCGTGCCGATGCGACCCTTAGGGTGGCCGATGCTGTTGATGCTGGTG
TTTGCGCCCCGGACGATGGTGCAGGAAGGTATCGCTGAAGTCTGGCAACTGGATGTCGGTCAGGGTCTGGCAATCCTCGT
GCGTACTCGGCATCACACATTGCTGTTTGATGCCGGACCACGCTTCGGAGAACTTGATCAGGGGGAGCGGGTGGTGTTGC
CGGCATTGCGCAAACTGGGGGTGGAGGATCTGGACCTGATGTTGATCAGCCATGCCCATGCCGATCATGCCGGCGGTGCC
CAGTCGGTTGCCAAGGGCCTGCCGGTGAAACAGGTGATCAGTGGTGAGCCGTCTGACTTGCCTGCACAGTTGCGAGCCGG
GCGTTGTGAGAGCGGCCGGCGATGGACCTGGGACAGCGTTGACTTCCAGCTTTGGCATTGGCCATTGGCCAGCGACAGCA
ATCAGAACTCCTGTGTATTGCTGATCGAGGCCAATGGCGAACGGTTGCTGTTGAGCGGCGACATTGATGTCTTTGCCGAG
CGAGCCCTGCTGGACAGCCCCATGGCCGTGCCCATCGATTGGTTGCAGGCACCGCACCACGGTAGTCGAAGCTCGTCGTC
CAAGGCGCTGCTGAATGTGTTGCAGCCCAAAGGCGCGCTGATCTCCCGTGGACAGGGCAACTCGTTCGGACATCCGCATC
CAACCGTCATCCAGCGTTACCGCAACCGAGACATGGCGATTTACGATAGCGCCGAACAGGGCGCCATCCGTCTGCAATTG
GGACGCTTCGAAGCACCCTGGACGATGCGTCAGGAGCGGCGTTTCTGGCGTGAACCAGCACCGCAAAGCCAATAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (198-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-682)

• Domain of unknown function (DUF4131) (DUF4131) (21-167)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	61.872	96.237	0.595
comA	Ralstonia pseudosolanacearum GMI1000	34.412	100	0.386