Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   QL280_RS08870 Genome accession   NZ_CP125291
Coordinates   1735070..1735690 (-) Length   206 a.a.
NCBI ID   WP_000839908.1    Uniprot ID   A0A0B7M636
Organism   Streptococcus pneumoniae strain 105_Kz     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1730070..1740690
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QL280_RS08845 (QL280_08845) recA 1730447..1731613 (-) 1167 WP_001085463.1 recombinase RecA Machinery gene
  QL280_RS08850 (QL280_08850) cinA 1731668..1732924 (-) 1257 WP_000642708.1 competence/damage-inducible protein A Machinery gene
  QL280_RS08855 (QL280_08855) - 1733009..1734025 (-) 1017 WP_000239282.1 LCP family protein -
  QL280_RS08860 (QL280_08860) - 1734033..1734551 (-) 519 WP_000455537.1 GNAT family N-acetyltransferase -
  QL280_RS08865 (QL280_08865) tsaE 1734541..1734984 (-) 444 WP_000288232.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  QL280_RS08870 (QL280_08870) comM 1735070..1735690 (-) 621 WP_000839908.1 hypothetical protein Regulator
  QL280_RS08875 (QL280_08875) - 1736073..1736936 (-) 864 WP_001093618.1 helix-turn-helix transcriptional regulator -
  QL280_RS08880 (QL280_08880) - 1737282..1739297 (+) 2016 WP_000732380.1 DUF1430 domain-containing protein -
  QL280_RS08885 (QL280_08885) - 1739299..1739931 (+) 633 WP_000571415.1 ABC transporter ATP-binding protein -
  QL280_RS10510 - 1740072..1740350 (+) 279 WP_000712962.1 hypothetical protein -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23552.72 Da        Isoelectric Point: 10.1254

>NTDB_id=830844 QL280_RS08870 WP_000839908.1 1735070..1735690(-) (comM) [Streptococcus pneumoniae strain 105_Kz]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLFYSMLLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYVRDFLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYIGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIVTLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=830844 QL280_RS08870 WP_000839908.1 1735070..1735690(-) (comM) [Streptococcus pneumoniae strain 105_Kz]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTTTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGAAGTCGGTGAAGCTTTTTTACAGTATGTTACTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTTTTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACGTGCGCGATTTTC
TTGCTATGCTAGACAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCACTTCTGATTTATATTGGACTGGGCTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGTTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B7M636

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

100

100

1
  comM Streptococcus pneumoniae R6

100

100

1
  comM Streptococcus pneumoniae TIGR4

100

100

1
  comM Streptococcus mitis NCTC 12261

38.974

94.66

0.369
  comM Streptococcus mitis SK321

38.974

94.66

0.369