Detailed information NTG0830643

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: QLX50_RS16375
• Genome accession: NZ_CP125283
• Coordinates: 3331083..3332246 (-)
• Length: 387 a.a.
• NCBI ID: WP_007614106.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain IFST-221
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3326083..3337246

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QLX50_RS16345 (QLX50_16345)	-	3326347..3326766 (-)	420	WP_012118571.1	TIGR03826 family flagellar region protein	-
QLX50_RS16350 (QLX50_16350)	comFC	3326840..3327529 (-)	690	WP_217807200.1	phosphoribosyltransferase family protein	Machinery gene
QLX50_RS16355 (QLX50_16355)	-	3327535..3327819 (-)	285	WP_003151389.1	competence protein ComFB	-
QLX50_RS16360 (QLX50_16360)	comFA	3327877..3329262 (-)	1386	WP_044801919.1	DEAD/DEAH box helicase	Machinery gene
QLX50_RS16365 (QLX50_16365)	-	3329371..3330219 (-)	849	WP_044801920.1	DegV family protein	-
QLX50_RS16370 (QLX50_16370)	degU	3330317..3331006 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
QLX50_RS16375 (QLX50_16375)	degS	3331083..3332246 (-)	1164	WP_007614106.1	two-component sensor histidine kinase DegS	Regulator
QLX50_RS16380 (QLX50_16380)	-	3332469..3333116 (+)	648	WP_007614107.1	YigZ family protein	-
QLX50_RS16385 (QLX50_16385)	-	3333121..3334341 (+)	1221	WP_044801921.1	LCP family protein	-
QLX50_RS16390 (QLX50_16390)	-	3334440..3335516 (-)	1077	WP_003151382.1	MraY family glycosyltransferase	-
QLX50_RS16395 (QLX50_16395)	-	3335649..3336845 (-)	1197	WP_044801922.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45028.81 Da
• Isoelectric Point: 6.8616

>NTDB_id=830643 QLX50_RS16375 WP_007614106.1 3331083..3332246(-) (degS) [Bacillus velezensis strain IFST-221]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENQRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEI
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=830643 QLX50_RS16375 WP_007614106.1 3331083..3332246(-) (degS) [Bacillus velezensis strain IFST-221]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTAGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTTGGTTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAAATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTACGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
TAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACCAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAATA
ACCGCTGATTTTGTCGTTCTCATCATTAAGGACAATGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.844	99.483	0.953