Detailed information NTG0830642

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: R3F75_RS23505
• Genome accession: NZ_CP139649
• Coordinates: 4479080..4480132 (+)
• Length: 350 a.a.
• NCBI ID: WP_014494880.1
• Uniprot ID: -
• Organism: Bradyrhizobium japonicum strain CNPSo 34
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4474080..4485132

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
R3F75_RS23485 (R3F75_23480)	-	4474719..4476308 (+)	1590	WP_028170233.1	ABC transporter substrate-binding protein	-
R3F75_RS23490 (R3F75_23485)	-	4476369..4477292 (+)	924	WP_014494877.1	ABC transporter permease	-
R3F75_RS23495 (R3F75_23490)	-	4477289..4478110 (+)	822	WP_038936568.1	ABC transporter permease	-
R3F75_RS23500 (R3F75_23495)	-	4478107..4479087 (+)	981	WP_039147918.1	ABC transporter ATP-binding protein	-
R3F75_RS23505 (R3F75_23500)	amiE	4479080..4480132 (+)	1053	WP_014494880.1	ABC transporter ATP-binding protein	Regulator
R3F75_RS23510 (R3F75_23505)	-	4480340..4480558 (+)	219	WP_038958760.1	hypothetical protein	-
R3F75_RS23515 (R3F75_23510)	-	4481462..4481680 (-)	219	WP_051664569.1	methyltransferase family protein	-
R3F75_RS23520 (R3F75_23515)	-	4481947..4483689 (-)	1743	WP_039147927.1	adenylate/guanylate cyclase domain-containing protein	-
R3F75_RS23525 (R3F75_23520)	-	4484065..4484811 (+)	747	WP_028170235.1	C13 family peptidase	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 38471.91 Da
• Isoelectric Point: 6.9600

>NTDB_id=830642 R3F75_RS23505 WP_014494880.1 4479080..4480132(+) (amiE) [Bradyrhizobium japonicum strain CNPSo 34]
MHEPQDMRGEARSDDDLILSIEDLAVHFPMGGGLLGRSRRVLRAVDGVDLSLRRGECLGLVGESGSGKSTVALSILGLLT
PTRGRIVLDGQVVTNRQSGDRKSLARTVQIVFQDPYASLNPRQTVRRTLEDPLRVHGVTAKSEIEDRVATMLRHVGLRPE
QADRYPHEFSGGQRQRIGIARALILNPRIVICDEPVSALDVSIRAQIINLLLELKDTLGLSYIMISHDLGVVEHMSDRVA
VMYLGRIVENGHWREIFERPAHPYTQALIAAIPDPLRHAPLATTGGDLPNPLNPPNGCAFSPRCRYAEAVCRHEPGPVLE
TRADGHEVRCWRADEIAGQTQLASTEGGHP

Nucleotide

• Length: 1053 bp

>NTDB_id=830642 R3F75_RS23505 WP_014494880.1 4479080..4480132(+) (amiE) [Bradyrhizobium japonicum strain CNPSo 34]
ATGCATGAGCCGCAAGACATGCGGGGTGAAGCGAGGTCGGACGACGATCTCATTCTCAGCATCGAGGATCTCGCGGTTCA
TTTTCCGATGGGGGGCGGCCTGCTGGGCCGCAGCCGGCGGGTGCTCCGTGCCGTCGACGGTGTCGATCTCAGCCTGAGAC
GGGGCGAATGCCTCGGCCTCGTCGGCGAGTCCGGCTCGGGCAAGTCGACCGTCGCATTGTCGATCCTGGGGCTCCTGACG
CCGACGCGCGGCCGTATCGTGCTGGACGGGCAGGTGGTGACGAACAGGCAGTCCGGCGACCGAAAGTCGCTGGCCCGCAC
CGTGCAGATCGTCTTTCAGGATCCCTACGCCTCGCTCAACCCACGCCAGACCGTCCGCCGCACGCTGGAAGATCCCCTGC
GTGTGCATGGCGTGACCGCGAAAAGCGAGATCGAGGACCGTGTTGCGACGATGCTGCGGCATGTCGGCCTGCGGCCGGAA
CAGGCCGACCGCTATCCGCACGAATTCTCCGGTGGCCAGCGCCAGCGCATCGGGATTGCGCGCGCCCTGATCCTCAATCC
CAGGATCGTCATCTGCGACGAGCCGGTATCGGCGCTCGACGTCTCGATCCGCGCCCAGATCATCAATTTGCTGCTGGAAT
TGAAGGACACGCTCGGTCTCTCCTACATCATGATCAGCCACGACCTCGGCGTCGTCGAGCACATGAGCGACCGCGTCGCC
GTCATGTATCTCGGCCGCATCGTCGAGAACGGCCACTGGCGCGAAATTTTTGAGCGCCCGGCGCACCCCTATACGCAAGC
CCTGATCGCGGCCATCCCCGATCCGCTGCGTCATGCGCCGTTGGCGACGACAGGCGGCGACCTTCCCAACCCGCTCAATC
CGCCGAACGGATGCGCCTTCAGCCCGCGTTGCCGGTACGCGGAGGCCGTGTGTCGTCACGAGCCCGGTCCGGTGCTGGAA
ACGCGCGCCGATGGACATGAGGTGAGGTGCTGGCGGGCGGACGAGATTGCGGGGCAGACGCAATTGGCTTCGACCGAGGG
CGGGCATCCCTAG

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (248-311)

• ABC transporter (ABC_tran) (46-196)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus thermophilus LMG 18311	39.329	93.714	0.369
amiE	Streptococcus thermophilus LMD-9	39.329	93.714	0.369
amiE	Streptococcus salivarius strain HSISS4	37.685	96.286	0.363