Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QLX50_RS01980 Genome accession   NZ_CP125283
Coordinates   391342..392295 (+) Length   317 a.a.
NCBI ID   WP_032872883.1    Uniprot ID   -
Organism   Bacillus velezensis strain IFST-221     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 386342..397295
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QLX50_RS01955 (QLX50_01955) - 386387..387814 (+) 1428 WP_282999937.1 HAMP domain-containing sensor histidine kinase -
  QLX50_RS01960 (QLX50_01960) rapC 387973..389121 (+) 1149 WP_029326229.1 Rap family tetratricopeptide repeat protein Regulator
  QLX50_RS01965 (QLX50_01965) phrC 389105..389224 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  QLX50_RS01970 (QLX50_01970) - 389374..389469 (-) 96 WP_012116800.1 YjcZ family sporulation protein -
  QLX50_RS01975 (QLX50_01975) - 389564..390928 (-) 1365 WP_007609394.1 aspartate kinase -
  QLX50_RS01980 (QLX50_01980) ceuB 391342..392295 (+) 954 WP_032872883.1 ABC transporter permease Machinery gene
  QLX50_RS01985 (QLX50_01985) - 392285..393232 (+) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  QLX50_RS01990 (QLX50_01990) - 393226..393984 (+) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  QLX50_RS01995 (QLX50_01995) - 394006..394950 (+) 945 WP_003156329.1 siderophore ABC transporter substrate-binding protein -
  QLX50_RS02000 (QLX50_02000) - 394992..396410 (-) 1419 WP_044802615.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34931.21 Da        Isoelectric Point: 9.6741

>NTDB_id=830587 QLX50_RS01980 WP_032872883.1 391342..392295(+) (ceuB) [Bacillus velezensis strain IFST-221]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSVATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=830587 QLX50_RS01980 WP_032872883.1 391342..392295(+) (ceuB) [Bacillus velezensis strain IFST-221]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCCAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTGTTCATGAAAATTCTCGAGAGAATCAAGTTTAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATCGTCAGTTCAGTCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCGTCCTGGCTGCAGGGGGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCTAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.481

99.685

0.533