Detailed information NTG0830585

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: QLX50_RS01960
• Genome accession: NZ_CP125283
• Coordinates: 387973..389121 (+)
• Length: 382 a.a.
• NCBI ID: WP_029326229.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain IFST-221
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 382973..394121

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QLX50_RS01940 (QLX50_01940)	-	383376..384059 (-)	684	WP_282999934.1	ABC transporter ATP-binding protein	-
QLX50_RS01945 (QLX50_01945)	-	384074..385504 (-)	1431	WP_282999935.1	ABC transporter permease	-
QLX50_RS01950 (QLX50_01950)	-	385717..386400 (+)	684	WP_282999936.1	response regulator transcription factor	-
QLX50_RS01955 (QLX50_01955)	-	386387..387814 (+)	1428	WP_282999937.1	HAMP domain-containing sensor histidine kinase	-
QLX50_RS01960 (QLX50_01960)	rapC	387973..389121 (+)	1149	WP_029326229.1	Rap family tetratricopeptide repeat protein	Regulator
QLX50_RS01965 (QLX50_01965)	phrC	389105..389224 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
QLX50_RS01970 (QLX50_01970)	-	389374..389469 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
QLX50_RS01975 (QLX50_01975)	-	389564..390928 (-)	1365	WP_007609394.1	aspartate kinase	-
QLX50_RS01980 (QLX50_01980)	ceuB	391342..392295 (+)	954	WP_032872883.1	ABC transporter permease	Machinery gene
QLX50_RS01985 (QLX50_01985)	-	392285..393232 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
QLX50_RS01990 (QLX50_01990)	-	393226..393984 (+)	759	WP_003156330.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45406.59 Da
• Isoelectric Point: 4.9221

>NTDB_id=830585 QLX50_RS01960 WP_029326229.1 387973..389121(+) (rapC) [Bacillus velezensis strain IFST-221]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDHMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEET
ISACFSYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=830585 QLX50_RS01960 WP_029326229.1 387973..389121(+) (rapC) [Bacillus velezensis strain IFST-221]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCATATGGAGCCTGATTCGAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGTTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACATATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCATGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGATGAGGAAACA
ATCAGCGCGTGTTTCAGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.461	100	0.825
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568