Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OH685_RS17580 Genome accession   NZ_CP125227
Coordinates   3746626..3747009 (-) Length   127 a.a.
NCBI ID   WP_000389061.1    Uniprot ID   -
Organism   Acinetobacter pittii strain SO1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3741626..3752009
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OH685_RS17565 (OH685_17755) pilJ 3743523..3745601 (-) 2079 WP_005072794.1 methyl-accepting chemotaxis protein -
  OH685_RS17570 (OH685_17760) pilI 3745644..3746180 (-) 537 WP_002116439.1 chemotaxis protein CheW -
  OH685_RS17575 (OH685_17765) pilH 3746241..3746603 (-) 363 WP_002116220.1 response regulator -
  OH685_RS17580 (OH685_17770) pilG 3746626..3747009 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  OH685_RS17585 (OH685_17775) - 3747294..3747932 (+) 639 WP_017400247.1 hypothetical protein -
  OH685_RS17590 (OH685_17780) nolF 3748001..3749110 (+) 1110 WP_126644997.1 efflux RND transporter periplasmic adaptor subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14200.23 Da        Isoelectric Point: 4.5762

>NTDB_id=830462 OH685_RS17580 WP_000389061.1 3746626..3747009(-) (pilG) [Acinetobacter pittii strain SO1]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=830462 OH685_RS17580 WP_000389061.1 3746626..3747009(-) (pilG) [Acinetobacter pittii strain SO1]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTGATTGATGACTCAAAAACCATTCGCCGTACAGCAGAAACCTTATT
ACAGCGCGAAGGCTGTGAAGTGATTACTGCTGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCGGATA
TTGTTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGTGCTTTGATAAAAAACTCTCAAAATTATCAG
AATATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCATGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

100

100

1
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37