Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   SLP98_RS01220 Genome accession   NZ_CP139204
Coordinates   258771..259406 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain HNZZ130D     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 253771..264406
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SLP98_RS01205 (SLP98_01205) - 254558..255742 (+) 1185 WP_000939109.1 S41 family peptidase -
  SLP98_RS01210 (SLP98_01210) - 255746..257167 (-) 1422 WP_000840547.1 sigma-54 dependent transcriptional regulator -
  SLP98_RS01215 (SLP98_01215) pilS 257192..258760 (-) 1569 WP_001160343.1 PAS domain-containing sensor histidine kinase Regulator
  SLP98_RS01220 (SLP98_01220) letA 258771..259406 (-) 636 WP_000633799.1 response regulator Regulator
  SLP98_RS01225 (SLP98_01225) pbpG 259619..260665 (+) 1047 WP_001984577.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  SLP98_RS01230 (SLP98_01230) thrC 260773..261912 (-) 1140 WP_000063593.1 threonine synthase -
  SLP98_RS01235 (SLP98_01235) - 261968..263269 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  SLP98_RS01240 (SLP98_01240) - 263514..264329 (-) 816 WP_005120616.1 DsbC family protein -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=829905 SLP98_RS01220 WP_000633799.1 258771..259406(-) (letA) [Acinetobacter baumannii strain HNZZ130D]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=829905 SLP98_RS01220 WP_000633799.1 258771..259406(-) (letA) [Acinetobacter baumannii strain HNZZ130D]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAATATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCATTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGTGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55