Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   SKB18_RS08225 Genome accession   NZ_CP139163
Coordinates   1679268..1679951 (+) Length   227 a.a.
NCBI ID   WP_012027525.1    Uniprot ID   A0A0H3MWH7
Organism   Streptococcus suis strain cnzyss2-311     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1674268..1684951
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SKB18_RS08205 - 1674349..1675860 (+) 1512 WP_012027529.1 ABC transporter permease/substrate-binding protein -
  SKB18_RS08210 - 1675870..1676631 (+) 762 WP_012027528.1 nuclear transport factor 2 family protein -
  SKB18_RS08215 - 1676778..1677902 (+) 1125 WP_012027527.1 aminotransferase -
  SKB18_RS08220 - 1677917..1679098 (-) 1182 WP_012027526.1 DUF2974 domain-containing protein -
  SKB18_RS08225 braR 1679268..1679951 (+) 684 WP_012027525.1 response regulator transcription factor Regulator
  SKB18_RS08230 - 1679944..1680936 (+) 993 WP_012027524.1 HAMP domain-containing sensor histidine kinase -
  SKB18_RS08235 - 1681032..1681790 (+) 759 WP_012027523.1 ABC transporter ATP-binding protein -
  SKB18_RS08240 - 1681792..1683801 (+) 2010 WP_012775277.1 ABC transporter permease -
  SKB18_RS08245 tnpA 1683976..1684440 (+) 465 WP_002939996.1 IS200/IS605-like element ISSsu4 family transposase -
  SKB18_RS08250 - 1684746..1684910 (+) 165 WP_012027521.1 hypothetical protein -

Sequence

Protein


Download         Length: 227 a.a.        Molecular weight: 26581.80 Da        Isoelectric Point: 4.5525

>NTDB_id=829499 SKB18_RS08225 WP_012027525.1 1679268..1679951(+) (braR) [Streptococcus suis strain cnzyss2-311]
MQKILLIEDDKTISQLVAKNLINWGYQVQEVKDFQMVLEQMEEFQPHLILLDIGLPFFNGYYWCQEIRKTSRVPIMFLSS
HDQPMDIVMAINMGADDYVTKPFEMTVLLAKIQGLLRRTYDFVGEQSLLWFEEISLDLKTMQVSYGQVVEELTRNEFQIL
RVLFEHGKEVVSREELMRELWNSDIFVDDNTLSVNIARLRKKLAELDLPDVIATKKGVGYGLVWTHE

Nucleotide


Download         Length: 684 bp        

>NTDB_id=829499 SKB18_RS08225 WP_012027525.1 1679268..1679951(+) (braR) [Streptococcus suis strain cnzyss2-311]
ATGCAGAAAATTCTTCTTATCGAGGATGATAAAACGATTAGCCAACTAGTTGCTAAAAACTTGATAAACTGGGGTTACCA
GGTGCAAGAGGTCAAGGATTTTCAGATGGTTTTGGAACAGATGGAAGAGTTTCAGCCCCATTTGATTTTACTGGATATTG
GTCTGCCGTTTTTCAATGGCTATTACTGGTGTCAGGAAATTCGCAAGACATCCCGTGTGCCCATTATGTTTCTGTCTTCC
CATGACCAGCCAATGGATATTGTTATGGCGATCAATATGGGGGCGGATGACTATGTGACCAAGCCCTTTGAAATGACGGT
TCTCCTGGCCAAAATACAGGGGCTTCTTAGAAGAACCTATGACTTTGTCGGAGAACAAAGTTTACTCTGGTTTGAGGAGA
TTTCCCTAGACCTAAAGACCATGCAGGTGTCCTATGGACAGGTTGTGGAAGAGCTGACGCGAAATGAATTTCAGATTTTA
CGCGTTTTATTTGAACATGGCAAGGAAGTGGTCAGCCGTGAGGAGCTGATGAGAGAACTCTGGAACAGTGATATTTTTGT
GGATGACAATACCCTGTCGGTTAACATCGCTCGCCTGCGTAAGAAATTGGCAGAACTGGATCTGCCAGATGTGATTGCGA
CCAAGAAAGGAGTAGGCTACGGCCTGGTGTGGACACATGAATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-221)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MWH7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

47.706

96.035

0.458
  vicR Streptococcus mutans UA159

39.13

100

0.396
  micA Streptococcus pneumoniae Cp1015

37.991

100

0.383