Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   R9806_RS17105 Genome accession   NZ_CP139044
Coordinates   4074109..4075233 (+) Length   374 a.a.
NCBI ID   WP_223776020.1    Uniprot ID   -
Organism   Streptomyces sp. KN37     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4069109..4080233
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  R9806_RS17090 (R9806_17090) - 4069887..4070678 (+) 792 WP_414080062.1 hypothetical protein -
  R9806_RS17095 (R9806_17095) - 4070682..4072430 (-) 1749 WP_320590286.1 BACON domain-containing protein -
  R9806_RS17100 (R9806_17100) radA/sms 4072620..4074029 (+) 1410 WP_223776021.1 DNA repair protein RadA Machinery gene
  R9806_RS17105 (R9806_17105) disA 4074109..4075233 (+) 1125 WP_223776020.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  R9806_RS17110 (R9806_17110) - 4075278..4076087 (-) 810 WP_223776019.1 hypothetical protein -
  R9806_RS17115 (R9806_17115) - 4076261..4076947 (+) 687 WP_320590287.1 phosphatase PAP2 family protein -
  R9806_RS17120 (R9806_17120) vraR 4076976..4077638 (-) 663 WP_223779139.1 response regulator transcription factor Regulator
  R9806_RS17125 (R9806_17125) - 4077647..4079302 (-) 1656 WP_320590288.1 sensor histidine kinase -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40238.08 Da        Isoelectric Point: 4.9269

>NTDB_id=829210 R9806_RS17105 WP_223776020.1 4074109..4075233(+) (disA) [Streptomyces sp. KN37]
MAANDRAANPGKSGGGSAADVLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFILDVEFTATRLR
ELCKLDGGIVLDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALSELDALTHAELLELSTVAKALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=829210 R9806_RS17105 WP_223776020.1 4074109..4075233(+) (disA) [Streptomyces sp. KN37]
GTGGCAGCCAACGACCGGGCAGCGAACCCCGGCAAGTCCGGCGGTGGCTCGGCCGCCGATGTGCTGATGCGCGCCTCCCT
GAGCGCCGTCGCGCCCGGCACGGCCCTGCGCGACGGCCTCGAACGCATCCTGCGCGGCAACACCGGCGGCCTGATCGTCC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGCACGGGCGGTTTCATCCTGGACGTCGAGTTCACGGCGACGCGTCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCCTCGACAAGGACATCACCAAGATCCTGCGCGCCGGCGTGCAGCTGGTGCC
GGACCCGACGATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCCGACCGCGTCTCCAAGCAGGTCGGCTTCCCGG
TCGTCTCCGTCTCGCAGTCCATGCGCCTGATCGCGCTGTACGTGGACGGGCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCGACCCTGGAGCGGTACAAGCTCCGTCTCGACGAGGTCGCGGGCACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTCACGGCGGTCGCCCAGCGCCTGGAGATGGTGCGCCGCATCG
CCACGGAGATCGCCGAGTACGTGGTGGAGCTCGGCACGGACGGCCGCCTTCTCGCGCTCCAGCTGGACGAGTTGATCGCG
GGCGTCGAGCCCGAGCGTGAGCTGGTCGTCAGGGACTACGTGCCCGAGCCGACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCGCTGTCCGAGCTGGACGCCCTCACCCACGCGGAGCTGCTGGAACTGTCCACCGTGGCCAAGGCCTTGGGGTACACCG
GCTCACCCGAGGCCCTGGACTCCGCCGTCTCGCCGCGCGGCTTCCGACTGCTCGCCAAGGTTCCCCGGCTTCCCGGCGCC
ATCATCGACCGCCTCGTCGAGCACTTCGGCGGCCTCCAGAAGCTGCTGGCCGCCAGCGTGGACGACCTCCAGACCGTGGA
CGGCGTGGGCGAGGCCCGTGCCCGCAGCGTCCGCGAGGGCCTCTCGCGCCTCGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAG

Domains

Predicted by InterProScan.

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)

Helix-hairpin-helix motif (HHH_2)

(324-359)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438