Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   H7675_RS06860 Genome accession   NZ_AP023389
Coordinates   1374839..1375648 (-) Length   269 a.a.
NCBI ID   WP_184004609.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain KUN-0012590     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1369839..1380648
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7675_RS06850 (KUN2590_13020) smc 1370175..1373714 (-) 3540 WP_136306146.1 chromosome segregation protein SMC -
  H7675_RS06855 (KUN2590_13030) rnc 1373715..1374407 (-) 693 WP_002985639.1 ribonuclease III -
  H7675_RS06860 (KUN2590_13040) vicX 1374839..1375648 (-) 810 WP_184004609.1 MBL fold metallo-hydrolase Regulator
  H7675_RS06865 (KUN2590_13050) vicK 1375652..1377004 (-) 1353 WP_002990673.1 cell wall metabolism sensor histidine kinase VicK Regulator
  H7675_RS06870 (KUN2590_13060) vicR 1376997..1377707 (-) 711 WP_002985645.1 response regulator YycF Regulator
  H7675_RS06875 (KUN2590_13070) - 1377869..1378903 (-) 1035 WP_011284595.1 DUF3114 domain-containing protein -
  H7675_RS06880 (KUN2590_13080) - 1378959..1380206 (-) 1248 WP_023612155.1 AMP-binding protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30109.23 Da        Isoelectric Point: 5.5314

>NTDB_id=82798 H7675_RS06860 WP_184004609.1 1374839..1375648(-) (vicX) [Streptococcus pyogenes strain KUN-0012590]
MNESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
IYANEKTWQLMDECNMLGKLDASQKHIFQRDKVLTFGDVDIESFGVSHDAIDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGYNTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTIHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=82798 H7675_RS06860 WP_184004609.1 1374839..1375648(-) (vicX) [Streptococcus pyogenes strain KUN-0012590]
ATGAATGAGAGTGGTTTTAAATATAGTATTTTAGCATCTGGGTCCACAGGAAATTGTTTTTATTTAGAAACACCTAAAAA
ACGCTTATTGATTGATGCAGGGCTTACTGGTAAGAAAATTACCAGTCTTCTTGCTGAAATTGACCGCAAACCTGAGGATT
TGGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGTGTAGGCGTTATGGCCCGCAAATACCATTTGGAT
ATCTATGCTAATGAAAAAACATGGCAGCTGATGGATGAGTGCAATATGCTAGGTAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGGGATAAAGTTTTGACCTTTGGAGATGTTGATATCGAAAGTTTTGGAGTCAGCCATGACGCTATTGATCCTC
AATTTTATCGGATTATGAAAGATAATAAGTCTTTTGTGATGTTGACAGATACAGGATATGTCAGTGATAGGATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAATCCAATCATGATATTGAAATTTTGAGATCAGGCTCTTATCCTTGGAG
CTTGAAGCAGCGTATTTTATCTGATTTAGGACATTTATCAAATGAAGATGGAGCGGGAGCCATGATTAGAAGCCTGGGGT
ACAATACCAAAAAAATATACCTAGGTCATCTGAGTAAAGAAAATAACATCAAAGAGTTAGCGCATATGACGATGGTCAAT
CAACTGGCTATGGCAGATTTAGCAGTAGGTACAGACTTTACGATCCATGATACCTCTCCAGATACTGCTTGTCCATTAAC
TGATATTTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762

Multiple sequence alignment