Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   QI003_RS19210 Genome accession   NZ_CP124601
Coordinates   3807415..3809712 (-) Length   765 a.a.
NCBI ID   WP_134975177.1    Uniprot ID   -
Organism   Bacillus stercoris strain BS21     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3802415..3814712
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QI003_RS19170 (QI003_19170) - 3802883..3803314 (+) 432 WP_014665185.1 Na(+)/H(+) antiporter subunit B -
  QI003_RS19175 (QI003_19175) - 3803314..3803655 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  QI003_RS19180 (QI003_19180) - 3803648..3805129 (+) 1482 WP_136653690.1 Na+/H+ antiporter subunit D -
  QI003_RS19185 (QI003_19185) - 3805135..3805611 (+) 477 WP_014665187.1 Na+/H+ antiporter subunit E -
  QI003_RS19190 (QI003_19190) - 3805611..3805895 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  QI003_RS19195 (QI003_19195) mnhG 3805879..3806253 (+) 375 WP_014665188.1 monovalent cation/H(+) antiporter subunit G -
  QI003_RS19200 (QI003_19200) - 3806292..3806672 (-) 381 WP_040081970.1 hotdog fold thioesterase -
  QI003_RS19205 (QI003_19205) comA 3806690..3807334 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  QI003_RS19210 (QI003_19210) comP 3807415..3809712 (-) 2298 WP_134975177.1 histidine kinase Regulator
  QI003_RS19215 (QI003_19215) comX 3809720..3809881 (-) 162 WP_003241045.1 competence pheromone ComX -
  QI003_RS19220 (QI003_19220) - 3809896..3810756 (-) 861 WP_071580795.1 polyprenyl synthetase family protein -
  QI003_RS19225 (QI003_19225) degQ 3810941..3811081 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  QI003_RS19230 (QI003_19230) - 3811303..3811428 (+) 126 WP_128422565.1 hypothetical protein -
  QI003_RS19235 (QI003_19235) - 3811543..3811911 (+) 369 WP_014665193.1 hypothetical protein -
  QI003_RS19240 (QI003_19240) pdeH 3811887..3813116 (-) 1230 WP_014665194.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 765 a.a.        Molecular weight: 88482.89 Da        Isoelectric Point: 7.5754

>NTDB_id=826647 QI003_RS19210 WP_134975177.1 3807415..3809712(-) (comP) [Bacillus stercoris strain BS21]
MKSRTNKISVLLVVISLLYVIYLTYISNNNLLVGATVSKGKNGDVVITNVDEYSMASYSGIEKGDIVKRINNQKINTKEI
KMNKLKNVSSMVVERNGKDVELKLTLFNDKNFSTYLIPLMFYIVCLFCCLFIIKINESKDLPSALVLIIFLLSASIAYIS
AGVSVKGDILCRCIMVVTLISVPLNYLLFLYHYFRELGTTLFDKKVFILYLVPIINVVCEMFRSHLFFRDYVPKLSLLSF
FFLFIIVGIYFCIILIKNKDTEQAHIIKVLTIINIFSFSPFLCLYLIPYVFLNAHYVSSFLAASFMMLIPFSLVFQFMTN
KIYNVDFILSRLRYYGFLALTPTIILISTIELISSPDSDFYSVKLTFLIYIIMLAVFYYKEVLDFRFRLKRVSEKFNYQD
SIYKFTQMIRDSTSLSQVFEELKNTILEVSLVSRAHVYEVSADGDIKLYDDENVNSFEKVYEKEFRKVTSEIGKIVEFNK
GFVMKIGERGGKSFVMLCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTIE
EKQRSDLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGLV
KALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDGVGFD
LEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2298 bp        

>NTDB_id=826647 QI003_RS19210 WP_134975177.1 3807415..3809712(-) (comP) [Bacillus stercoris strain BS21]
ATGAAGTCTAGAACCAATAAAATTTCTGTATTGTTAGTTGTAATAAGTCTGTTATATGTTATTTATTTGACCTATATAAG
CAATAATAATTTGTTAGTTGGAGCAACTGTTTCGAAAGGGAAGAACGGAGACGTTGTAATTACCAATGTAGATGAATATT
CAATGGCATCATACAGCGGAATAGAAAAAGGGGATATCGTAAAGCGTATTAATAATCAAAAGATAAACACTAAAGAAATA
AAAATGAATAAGCTTAAAAATGTGAGCTCAATGGTTGTTGAGAGAAATGGCAAGGATGTTGAGCTAAAGCTGACTTTATT
TAATGATAAAAATTTTTCTACTTACTTAATACCGTTAATGTTTTATATTGTTTGTTTATTTTGTTGCCTATTTATAATAA
AAATAAATGAATCAAAGGATTTACCATCTGCTTTAGTTTTAATTATATTTCTGTTATCGGCTTCTATTGCTTATATAAGC
GCAGGAGTTTCTGTTAAAGGCGATATACTATGCAGATGTATTATGGTGGTAACATTAATATCTGTACCGCTAAACTACCT
TCTCTTTCTTTATCATTATTTTAGAGAGTTAGGCACTACCTTATTTGATAAAAAAGTTTTCATTTTATATTTGGTACCGA
TCATAAATGTAGTGTGTGAAATGTTTCGTTCACATCTTTTCTTTCGTGATTATGTGCCTAAATTAAGTTTACTATCCTTT
TTCTTTTTATTTATCATAGTAGGGATATATTTCTGTATCATTTTAATTAAAAATAAAGATACTGAACAAGCGCATATTAT
TAAAGTTCTCACTATTATTAATATCTTTTCTTTCTCACCTTTTTTGTGTTTATATTTGATACCTTATGTCTTTTTAAATG
CGCACTATGTTTCATCCTTTTTAGCAGCTTCATTTATGATGCTAATACCTTTCTCCTTAGTATTTCAATTCATGACAAAT
AAAATCTATAATGTGGATTTTATTTTAAGCAGATTAAGGTATTATGGCTTTTTAGCTCTAACGCCAACAATTATTCTAAT
CTCTACAATTGAATTAATTAGTAGTCCTGATAGTGATTTTTATAGTGTTAAACTAACCTTTTTAATTTATATTATCATGT
TGGCGGTTTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAAAGGGTCTCGGAAAAATTCAATTATCAAGAC
AGTATATATAAATTCACGCAGATGATAAGAGACTCTACTTCCTTGTCTCAAGTATTTGAAGAACTGAAAAATACTATACT
TGAGGTTTCTCTTGTTAGCCGAGCACATGTATATGAAGTTTCAGCTGACGGAGATATTAAACTATATGATGATGAGAACG
TAAATTCATTTGAAAAAGTCTATGAAAAAGAATTTAGAAAAGTAACATCCGAAATAGGGAAAATCGTTGAATTTAATAAA
GGTTTTGTCATGAAGATAGGTGAACGCGGTGGGAAATCATTTGTAATGCTTTGTTTATCTAAAATGAATACGCCCCGTCT
TACACTTGAAGAACTTTCTTGGCTGAAAACATTGGCTTTTTATACAAACGTATCGATCGAAAACGTCATGAAAATTGAAG
AACTGATGAGTCATTTAGAAGAAATAAAACAACAAGAATCCAACCCCGTATGGCTCAAAAAACTCATGTACACGATCGAG
GAAAAACAACGCTCCGATCTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGACTTGATTTCCTTAAAACGCCAGTGTGA
GCTGTTTTTGGGTGATTTTAAAAAGGATGACAATCCGTGCCGTGAAGAAGTGCAGGACAAGCTTGTACAGATGAATGAGC
AGATGTCAGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGAGACCGCAGCTTCTGTATGATCTTGGATTGGTG
AAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCATTTCATATCCGTTTAAATACCGGCAGATTTACGGC
TTCCCTTGATCTGGATTCGCAGCTGAATTTATACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCAAGCACTCTCAGG
CGACGGATGTGCTGATTATGCTCATCAGTATACAAAACAAAATTGTTCTTCATTATGAGGACGATGGCGTAGGGTTTGAC
CTAGAAAAAAATACTGAACATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTTAGATGGGCGCCT
TCGGATTGAAACGAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.067

100

0.596