Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   QI003_RS02160 Genome accession   NZ_CP124601
Coordinates   429271..430221 (+) Length   316 a.a.
NCBI ID   WP_014662773.1    Uniprot ID   A0A292GGZ9
Organism   Bacillus stercoris strain BS21     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 424271..435221
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QI003_RS02135 (QI003_02135) yclK 424333..425754 (+) 1422 WP_103031555.1 two-component system sensor histidine kinase YclK -
  QI003_RS02140 (QI003_02140) rapC 425917..427065 (+) 1149 WP_014662770.1 response regulator aspartate phosphatase RapC Regulator
  QI003_RS02145 (QI003_02145) phrC 427049..427171 (+) 123 WP_014662771.1 phosphatase RapC inhibitor PhrC Regulator
  QI003_RS02150 (QI003_02150) - 427269..427379 (-) 111 WP_040084173.1 YjcZ family sporulation protein -
  QI003_RS02155 (QI003_02155) - 427522..428886 (-) 1365 WP_014662772.1 aspartate kinase -
  QI003_RS02160 (QI003_02160) ceuB 429271..430221 (+) 951 WP_014662773.1 petrobactin ABC transporter permease YclN Machinery gene
  QI003_RS02165 (QI003_02165) yclO 430214..431161 (+) 948 WP_282373968.1 petrobactin ABC transporter permease YclO -
  QI003_RS02170 (QI003_02170) yclP 431155..431913 (+) 759 WP_014662775.1 petrobactin ABC transporter ATP-binding protein YclP -
  QI003_RS02175 (QI003_02175) yclQ 431935..432888 (+) 954 WP_014662776.1 petrobactin ABC transporter substrate-binding protein YclQ -
  QI003_RS02180 (QI003_02180) - 432936..434354 (-) 1419 WP_282373969.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34857.25 Da        Isoelectric Point: 9.9364

>NTDB_id=826588 QI003_RS02160 WP_014662773.1 429271..430221(+) (ceuB) [Bacillus stercoris strain BS21]
MKLRYLFILLIILAVTSVFIGVEDLSPLDLFDLSKQEASTLFASRLPRLISIVIAGLSMSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLIKMLVAFVFALAGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTLAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=826588 QI003_RS02160 WP_014662773.1 429271..430221(+) (ceuB) [Bacillus stercoris strain BS21]
ATGAAGCTACGTTATTTATTTATTCTACTTATCATATTAGCCGTCACATCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTTTTCGATTTAAGCAAACAAGAGGCGTCAACGCTGTTTGCAAGCCGTTTGCCGCGATTAATCAGTATTGTCA
TCGCGGGCTTAAGCATGAGCATCTGCGGCTTGATTATGCAGCAGATCAGCAGAAACAAATTCGTGTCACCGACGACGGCG
GGCACGATGGATTGGGCTCGGCTCGGCATTTTAATTTCCTTGCTGCTGTTTACATCCGCCAGTCCTTTAATCAAAATGCT
GGTCGCGTTTGTCTTTGCCCTAGCAGGCAACTTCCTGTTTATGAAAATCCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTTGTCGGTTTAATGCTCGGGAATATCGTCAGTTCAATCGCGACTTTTATCGCGTATAAATATGACTTGATC
CAGAACGTGTCATCATGGCTTCAGGGAGACTTCTCCTTAGTCGTGAAAGGGAGATACGAGCTTCTTTATCTGAGTATTCC
GCTCGTTATCATTGCCTATGTGTATGCGGATAAATTCACATTGGCCGGTATGGGAGAAAGCTTTTCTGTCAATCTCGGCC
TAAAGTACAAAAGGGTAGTGAACATCGGGCTCATTATCGTGTCCCTGATCACGTCTCTTGTCATTTTGACTGTCGGTATG
CTGCCGTTTCTCGGTTTAATCATCCCGAATATTGTATCGATTTACAGAGGAGACAATCTGAAGAGCAGCCTGCCGCATAC
TGCGCTATTGGGAGCGGTTTTTGTGCTGTTTTGCGATATATTGGGCAGAGTCATTATCTTCCCTTATGAAATCTCGATTG
GCCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A292GGZ9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52.532

100

0.525