Detailed information NTG0082496

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: M2Y46_RS05325
• Genome accession: NZ_AP023347
• Coordinates: 1116716..1117516 (-)
• Length: 266 a.a.
• NCBI ID: WP_180503901.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain JSHR6
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1111716..1122516

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M2Y46_RS05285	-	1112453..1113238 (-)	786	WP_212883482.1	hypothetical protein	-
M2Y46_RS05290	-	1113238..1113619 (-)	382	Protein_1031	DUF1294 domain-containing protein	-
M2Y46_RS05295	-	1113942..1114103 (-)	162	WP_017282730.1	hypothetical protein	-
M2Y46_RS05300 (JSHR6_10540)	-	1114168..1114503 (-)	336	WP_248415196.1	lysozyme	-
M2Y46_RS05305 (JSHR6_10550)	-	1114633..1115193 (-)	561	WP_248415197.1	hypothetical protein	-
M2Y46_RS05310 (JSHR6_10560)	-	1115177..1115515 (-)	339	WP_000699911.1	hypothetical protein	-
M2Y46_RS07490 (JSHR6_10570)	-	1115712..1115966 (-)	255	WP_282568807.1	tetratricopeptide repeat protein	-
M2Y46_RS07495 (JSHR6_10580)	-	1116002..1116175 (-)	174	WP_249406027.1	tetratricopeptide repeat protein	-
M2Y46_RS05320 (JSHR6_10590)	dprB	1116315..1116719 (-)	405	WP_248415198.1	Holliday junction resolvase RuvX	Machinery gene
M2Y46_RS05325 (JSHR6_10600)	dprA	1116716..1117516 (-)	801	WP_180503901.1	DNA-processing protein DprA	Machinery gene
M2Y46_RS05330 (JSHR6_10610)	minE	1117523..1117756 (-)	234	WP_000051412.1	cell division topological specificity factor MinE	-
M2Y46_RS05335 (JSHR6_10620)	minD	1117753..1118559 (-)	807	WP_024116666.1	septum site-determining protein MinD	-
M2Y46_RS05340 (JSHR6_10630)	ilvC	1118584..1119576 (-)	993	WP_248415199.1	ketol-acid reductoisomerase	-
M2Y46_RS05350 (JSHR6_10640)	-	1119825..1120607 (+)	783	WP_248415200.1	NAD+ synthase	-
M2Y46_RS05355 (JSHR6_10650)	-	1120604..1121542 (+)	939	WP_248415201.1	tetraacyldisaccharide 4'-kinase	-
M2Y46_RS05360 (JSHR6_10660)	pseH	1121475..1122017 (-)	543	WP_025222557.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29866.82 Da
• Isoelectric Point: 8.7867

>NTDB_id=82496 M2Y46_RS05325 WP_180503901.1 1116716..1117516(-) (dprA) [Helicobacter pylori strain JSHR6]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDVVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYFAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=82496 M2Y46_RS05325 WP_180503901.1 1116716..1117516(-) (dprA) [Helicobacter pylori strain JSHR6]
ATGAAAAGTAATTTCCAATACAGCGCGCTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCACCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCTAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGTAGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGTAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTTGTTTTACCCCAACGCCTGAATGAAAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTTTGCGAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAGCGCATCAATCATCTCGTGGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.617	100	0.966
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.788	84.962	0.406