Detailed information NTG0824813

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: SE146_RS09230
• Genome accession: NZ_CP138339
• Coordinates: 1763354..1763938 (+)
• Length: 194 a.a.
• NCBI ID: WP_003694238.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain TH2288
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1758354..1768938

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SE146_RS09195 (SE146_09180)	-	1759093..1759203 (+)	111	Protein_1780	IS5/IS1182 family transposase	-
SE146_RS09200 (SE146_09185)	-	1759284..1760072 (-)	789	WP_003697625.1	class I SAM-dependent methyltransferase	-
SE146_RS09205 (SE146_09190)	bioH	1760069..1760818 (-)	750	WP_010360850.1	pimeloyl-ACP methyl ester esterase BioH	-
SE146_RS09210 (SE146_09195)	-	1760817..1761542 (+)	726	WP_003689912.1	ComF family protein	-
SE146_RS09215 (SE146_09200)	trmL	1761607..1762071 (+)	465	WP_003689916.1	tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL	-
SE146_RS09220 (SE146_09205)	-	1762199..1762885 (+)	687	WP_003689919.1	septal ring lytic transglycosylase RlpA family protein	-
SE146_RS09225 (SE146_09210)	-	1762946..1763272 (+)	327	WP_003689921.1	PepSY domain-containing protein	-
SE146_RS09230 (SE146_09215)	ruvA	1763354..1763938 (+)	585	WP_003694238.1	Holliday junction branch migration protein RuvA	Machinery gene
SE146_RS09235 (SE146_09220)	-	1763938..1764075 (+)	138	WP_003689926.1	hypothetical protein	-
SE146_RS09240 (SE146_09225)	-	1764101..1765957 (+)	1857	WP_003689927.1	ABC transporter ATP-binding protein	-
SE146_RS09245 (SE146_09230)	rsgA	1765962..1766885 (+)	924	WP_003689928.1	ribosome small subunit-dependent GTPase A	-
SE146_RS09250 (SE146_09235)	-	1766998..1767222 (+)	225	WP_003689929.1	exodeoxyribonuclease VII small subunit	-
SE146_RS09255 (SE146_09240)	-	1767206..1768102 (+)	897	WP_003691917.1	polyprenyl synthetase family protein	-
SE146_RS09260 (SE146_09245)	-	1768219..1768518 (-)	300	WP_010359269.1	DUF2818 family protein	-

Sequence

Protein

• Length: 194 a.a.
• Molecular weight: 20829.12 Da
• Isoelectric Point: 7.2073

>NTDB_id=824813 SE146_RS09230 WP_003694238.1 1763354..1763938(+) (ruvA) [Neisseria gonorrhoeae strain TH2288]
MISRLTGKLVEKNPPQIVIDVNGVGYEADVSMQTFYNLPPVGESVQLFTQLIIREDAHLLFGFATAEERKTFRQLIKVGG
IGAKTALGILSAMTADELARAVAEEDVKRLSSAPGIGKKTAERMVLELRGKLVAHTVTDRLFAASPAADETEDIVSTLLA
LGYNEREAKAAVKGVPKGTDVGEGVRLALKNLLK

Nucleotide

• Length: 585 bp

>NTDB_id=824813 SE146_RS09230 WP_003694238.1 1763354..1763938(+) (ruvA) [Neisseria gonorrhoeae strain TH2288]
ATGATCAGCAGACTGACCGGCAAACTGGTTGAAAAAAACCCTCCGCAAATCGTCATCGATGTCAACGGTGTCGGTTATGA
AGCCGACGTATCGATGCAGACCTTCTACAACCTGCCGCCCGTGGGTGAAAGCGTACAACTGTTTACCCAGCTTATCATTC
GGGAAGACGCACATCTTTTATTTGGTTTTGCCACTGCGGAAGAACGCAAGACCTTCCGCCAACTGATTAAGGTCGGCGGC
ATCGGCGCGAAAACGGCTTTGGGCATTTTGTCGGCGATGACGGCAGACGAGCTGGCGCGGGCGGTTGCAGAAGAAGATGT
CAAACGCCTCTCCTCCGCTCCGGGAATCGGCAAAAAAACCGCCGAACGTATGGTCTTGGAACTGCGCGGCAAGCTGGTCG
CGCATACGGTAACGGACAGGCTGTTTGCCGCCTCACCCGCCGCCGACGAAACGGAAGACATCGTCAGCACGCTGCTTGCG
CTGGGTTACAACGAACGCGAGGCAAAAGCGGCGGTCAAAGGCGTTCCGAAGGGGACGGACGTGGGCGAAGGCGTGCGCCT
TGCCCTGAAAAACCTGCTGAAATAA

Domains

Predicted by InterProScan.

• Helix-hairpin-helix domain (HHH_5) (72-129)

• RuvA N terminal domain (RuvA_N) (1-62)

• RuvA, C-terminal domain (RuvA_C) (150-192)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Streptococcus pneumoniae TIGR4	37.5	100	0.387
ruvA	Streptococcus pneumoniae R6	37.5	100	0.387
ruvA	Streptococcus pneumoniae D39	37.5	100	0.387
ruvA	Bacillus subtilis subsp. subtilis str. 168	34.951	100	0.371