Detailed information NTG0082450

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: M2Y48_RS02465
• Genome accession: NZ_AP023344
• Coordinates: 505562..506362 (+)
• Length: 266 a.a.
• NCBI ID: WP_248420081.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain JSHR3
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 500562..511362

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
M2Y48_RS02430 (JSHR3_05050)	pseH	501057..501599 (+)	543	WP_212846630.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
M2Y48_RS02435 (JSHR3_05060)	-	501532..502470 (-)	939	WP_248420076.1	tetraacyldisaccharide 4'-kinase	-
M2Y48_RS02440 (JSHR3_05070)	-	502467..503249 (-)	783	WP_120878727.1	NAD+ synthase	-
M2Y48_RS02450 (JSHR3_05080)	ilvC	503497..504489 (+)	993	WP_248420078.1	ketol-acid reductoisomerase	-
M2Y48_RS02455 (JSHR3_05090)	minD	504514..505320 (+)	807	WP_248420079.1	septum site-determining protein MinD	-
M2Y48_RS02460 (JSHR3_05100)	minE	505317..505550 (+)	234	WP_050851278.1	cell division topological specificity factor MinE	-
M2Y48_RS02465 (JSHR3_05110)	dprA	505562..506362 (+)	801	WP_248420081.1	DNA-processing protein DprA	Machinery gene
M2Y48_RS02470 (JSHR3_05120)	dprB	506359..506763 (+)	405	WP_000599207.1	Holliday junction resolvase RuvX	Machinery gene
M2Y48_RS02475 (JSHR3_05130)	-	506895..507257 (+)	363	WP_248420083.1	tetratricopeptide repeat protein	-
M2Y48_RS02480 (JSHR3_05140)	-	507446..507784 (+)	339	WP_000699916.1	hypothetical protein	-
M2Y48_RS02485 (JSHR3_05150)	-	507768..508328 (+)	561	WP_154462112.1	hypothetical protein	-
M2Y48_RS02490 (JSHR3_05160)	-	508339..508653 (+)	315	WP_212846621.1	lysozyme	-
M2Y48_RS02495 (JSHR3_05170)	-	508753..509019 (+)	267	WP_000404335.1	hypothetical protein	-
M2Y48_RS02500	-	509349..509737 (+)	389	Protein_495	DUF1294 domain-containing protein	-
M2Y48_RS02505	-	509737..510522 (+)	786	WP_108304232.1	hypothetical protein	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29762.71 Da
• Isoelectric Point: 8.5925

>NTDB_id=82450 M2Y48_RS02465 WP_248420081.1 505562..506362(+) (dprA) [Helicobacter pylori strain JSHR3]
MKSNFQYSTLENIPKAFDILKDPPKKLYCAGDIKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPINNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDHHLKEMPEIKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=82450 M2Y48_RS02465 WP_248420081.1 505562..506362(+) (dprA) [Helicobacter pylori strain JSHR3]
ATGAAAAGCAACTTCCAATACAGCACGCTAGAGAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGCGGGCGATATAAAGCTTTTAGATGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCTAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTAATCTATCCCATAAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCTAGATTAGCTCAAAAGTATCAAAAACCCTTATTTGTTTTACCCCAGCGTCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAATCAAAGACGAATTTTTGGAATATTGCGCCAAAAACCCAAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGCTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414