Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | QHG52_RS09425 | Genome accession | NZ_CP123912 |
| Coordinates | 2053683..2054066 (+) | Length | 127 a.a. |
| NCBI ID | WP_004830987.1 | Uniprot ID | N9F1A6 |
| Organism | Acinetobacter bereziniae strain UCO-553 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2048683..2059066
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QHG52_RS09395 | kdsB | 2049477..2050238 (+) | 762 | WP_005029263.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| QHG52_RS09400 | - | 2050276..2051256 (+) | 981 | WP_005029261.1 | DNA polymerase III, delta' subunit | - |
| QHG52_RS09405 | - | 2051283..2051624 (+) | 342 | WP_004830992.1 | PilZ domain-containing protein | - |
| QHG52_RS09410 | - | 2051652..2052425 (+) | 774 | WP_005029259.1 | TatD family hydrolase | - |
| QHG52_RS09415 | - | 2052510..2053124 (+) | 615 | WP_005029256.1 | TetR/AcrR family transcriptional regulator | - |
| QHG52_RS09420 | - | 2053130..2053696 (+) | 567 | WP_005029254.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| QHG52_RS09425 | xcpV | 2053683..2054066 (+) | 384 | WP_004830987.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| QHG52_RS09430 | xcpW | 2054069..2054722 (+) | 654 | WP_005029252.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| QHG52_RS09435 | gspK | 2054715..2055686 (+) | 972 | WP_004830985.1 | type II secretion system minor pseudopilin GspK | - |
| QHG52_RS09440 | - | 2055912..2056508 (+) | 597 | WP_005029250.1 | 6-carboxytetrahydropterin synthase | - |
| QHG52_RS09445 | ung | 2056583..2057296 (+) | 714 | WP_004830983.1 | uracil-DNA glycosylase | - |
| QHG52_RS09450 | - | 2057293..2058414 (+) | 1122 | WP_004830982.1 | enoyl-CoA hydratase/isomerase family protein | - |
| QHG52_RS09455 | tadA | 2058421..2058945 (+) | 525 | WP_005029246.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14083.38 Da Isoelectric Point: 9.7757
>NTDB_id=823074 QHG52_RS09425 WP_004830987.1 2053683..2054066(+) (xcpV) [Acinetobacter bereziniae strain UCO-553]
MKKNKGFTLIEVVVALAIFAVAAMALTKVAMQYTQSTANAILRTKAQFVAQNEISMMMINREWLTGTASKQITAQGETWQ
VDKKAESTLSPDVQKIDVQVSLFNTDTGKVEAGITNMVFYNYPIKEK
MKKNKGFTLIEVVVALAIFAVAAMALTKVAMQYTQSTANAILRTKAQFVAQNEISMMMINREWLTGTASKQITAQGETWQ
VDKKAESTLSPDVQKIDVQVSLFNTDTGKVEAGITNMVFYNYPIKEK
Nucleotide
Download Length: 384 bp
>NTDB_id=823074 QHG52_RS09425 WP_004830987.1 2053683..2054066(+) (xcpV) [Acinetobacter bereziniae strain UCO-553]
ATGAAGAAAAATAAAGGCTTTACCCTTATCGAAGTGGTAGTGGCATTGGCGATCTTTGCTGTTGCAGCAATGGCTTTGAC
TAAAGTTGCGATGCAATATACCCAATCTACAGCCAATGCCATTCTACGGACCAAAGCACAATTTGTTGCACAAAATGAAA
TTTCAATGATGATGATTAACCGAGAGTGGTTAACTGGAACAGCTTCAAAACAGATCACGGCTCAAGGTGAAACATGGCAA
GTGGATAAAAAAGCAGAGTCTACACTGAGTCCTGATGTGCAAAAAATCGATGTGCAGGTCAGTTTATTTAATACTGATAC
AGGTAAAGTGGAAGCAGGAATCACCAATATGGTGTTTTATAATTATCCAATCAAAGAAAAATAG
ATGAAGAAAAATAAAGGCTTTACCCTTATCGAAGTGGTAGTGGCATTGGCGATCTTTGCTGTTGCAGCAATGGCTTTGAC
TAAAGTTGCGATGCAATATACCCAATCTACAGCCAATGCCATTCTACGGACCAAAGCACAATTTGTTGCACAAAATGAAA
TTTCAATGATGATGATTAACCGAGAGTGGTTAACTGGAACAGCTTCAAAACAGATCACGGCTCAAGGTGAAACATGGCAA
GTGGATAAAAAAGCAGAGTCTACACTGAGTCCTGATGTGCAAAAAATCGATGTGCAGGTCAGTTTATTTAATACTGATAC
AGGTAAAGTGGAAGCAGGAATCACCAATATGGTGTTTTATAATTATCCAATCAAAGAAAAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
76 |
98.425 |
0.748 |